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Items: 1 to 20 of 128

1.

Specific and modular binding code for cytosine recognition in Pumilio/FBF (PUF) RNA-binding domains.

Dong S, Wang Y, Cassidy-Amstutz C, Lu G, Bigler R, Jezyk MR, Li C, Hall TM, Wang Z.

J Biol Chem. 2011 Jul 29;286(30):26732-42. doi: 10.1074/jbc.M111.244889. Epub 2011 Jun 8.

2.

Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket.

Qiu C, Kershner A, Wang Y, Holley CP, Wilinski D, Keles S, Kimble J, Wickens M, Hall TM.

J Biol Chem. 2012 Feb 24;287(9):6949-57. doi: 10.1074/jbc.M111.326264. Epub 2011 Dec 28.

3.

A divergent Pumilio repeat protein family for pre-rRNA processing and mRNA localization.

Qiu C, McCann KL, Wine RN, Baserga SJ, Hall TM.

Proc Natl Acad Sci U S A. 2014 Dec 30;111(52):18554-9. doi: 10.1073/pnas.1407634112. Epub 2014 Dec 15.

4.

A universal code for RNA recognition by PUF proteins.

Filipovska A, Razif MF, Nygård KK, Rackham O.

Nat Chem Biol. 2011 May 15;7(7):425-7. doi: 10.1038/nchembio.577.

PMID:
21572425
5.

Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site.

Valley CT, Porter DF, Qiu C, Campbell ZT, Hall TM, Wickens M.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6054-9. doi: 10.1073/pnas.1200521109. Epub 2012 Mar 30.

6.

Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.

Wang Y, Opperman L, Wickens M, Hall TM.

Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20186-91. doi: 10.1073/pnas.0812076106. Epub 2009 Nov 9.

7.

Biochemical characterization of the Caenorhabditis elegans FBF.CPB-1 translational regulation complex identifies conserved protein interaction hotspots.

Menichelli E, Wu J, Campbell ZT, Wickens M, Williamson JR.

J Mol Biol. 2013 Feb 22;425(4):725-37. doi: 10.1016/j.jmb.2012.11.012. Epub 2012 Nov 15.

8.

Engineered proteins with Pumilio/fem-3 mRNA binding factor scaffold to manipulate RNA metabolism.

Wang Y, Wang Z, Tanaka Hall TM.

FEBS J. 2013 Aug;280(16):3755-67. doi: 10.1111/febs.12367. Epub 2013 Jun 24. Review.

9.

A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity.

Stumpf CR, Kimble J, Wickens M.

RNA. 2008 Aug;14(8):1550-7. doi: 10.1261/rna.1095908. Epub 2008 Jun 25.

10.

A protein.protein interaction platform involved in recruitment of GLD-3 to the FBF.fem-3 mRNA complex.

Wu J, Campbell ZT, Menichelli E, Wickens M, Williamson JR.

J Mol Biol. 2013 Feb 22;425(4):738-54. doi: 10.1016/j.jmb.2012.11.013. Epub 2012 Nov 15.

11.

Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p.

Miller MT, Higgin JJ, Hall TM.

Nat Struct Mol Biol. 2008 Apr;15(4):397-402. doi: 10.1038/nsmb.1390. Epub 2008 Mar 9.

12.

Pumilio Puf domain RNA-binding proteins in Arabidopsis.

Abbasi N, Park YI, Choi SB.

Plant Signal Behav. 2011 Mar;6(3):364-8. Epub 2011 Mar 1. Review.

13.

Modular recognition of nucleic acids by PUF, TALE and PPR proteins.

Filipovska A, Rackham O.

Mol Biosyst. 2012 Mar;8(3):699-708. doi: 10.1039/c2mb05392f. Epub 2012 Jan 10. Review.

PMID:
22234420
14.

Target selection by natural and redesigned PUF proteins.

Porter DF, Koh YY, VanVeller B, Raines RT, Wickens M.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15868-73. doi: 10.1073/pnas.1508501112. Epub 2015 Dec 14.

15.

Stacking interactions in PUF-RNA complexes.

Koh YY, Wang Y, Qiu C, Opperman L, Gross L, Tanaka Hall TM, Wickens M.

RNA. 2011 Apr;17(4):718-27. doi: 10.1261/rna.2540311. Epub 2011 Mar 3.

16.

Understanding and engineering RNA sequence specificity of PUF proteins.

Lu G, Dolgner SJ, Hall TM.

Curr Opin Struct Biol. 2009 Feb;19(1):110-5. doi: 10.1016/j.sbi.2008.12.009. Epub 2009 Jan 29.

17.

Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity.

Campbell ZT, Bhimsaria D, Valley CT, Rodriguez-Martinez JA, Menichelli E, Williamson JR, Ansari AZ, Wickens M.

Cell Rep. 2012 May 31;1(5):570-81.

18.

A Nucleolar PUF RNA-binding Protein with Specificity for a Unique RNA Sequence.

Zhang C, Muench DG.

J Biol Chem. 2015 Dec 11;290(50):30108-18. doi: 10.1074/jbc.M115.691675. Epub 2015 Oct 20.

19.

De-coding and re-coding RNA recognition by PUF and PPR repeat proteins.

Hall TM.

Curr Opin Struct Biol. 2016 Feb;36:116-21. doi: 10.1016/j.sbi.2016.01.010. Epub 2016 Feb 11. Review.

20.

Post-transcriptional regulation through the HO 3'-UTR by Mpt5, a yeast homolog of Pumilio and FBF.

Tadauchi T, Matsumoto K, Herskowitz I, Irie K.

EMBO J. 2001 Feb 1;20(3):552-61.

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