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Items: 1 to 20 of 100

1.

Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing.

Santure AW, Gratten J, Mossman JA, Sheldon BC, Slate J.

BMC Genomics. 2011 Jun 2;12:283. doi: 10.1186/1471-2164-12-283.

2.

Genome-wide SNP detection in the great tit Parus major using high throughput sequencing.

van Bers NE, van Oers K, Kerstens HH, Dibbits BW, Crooijmans RP, Visser ME, Groenen MA.

Mol Ecol. 2010 Mar;19 Suppl 1:89-99. doi: 10.1111/j.1365-294X.2009.04486.x.

PMID:
20331773
3.
5.

The design and cross-population application of a genome-wide SNP chip for the great tit Parus major.

Van Bers NE, Santure AW, Van Oers K, De Cauwer I, Dibbits BW, Mateman C, Crooijmans RP, Sheldon BC, Visser ME, Groenen MA, Slate J.

Mol Ecol Resour. 2012 Jul;12(4):753-70. doi: 10.1111/j.1755-0998.2012.03141.x. Epub 2012 Apr 5.

PMID:
22487530
6.

Mass production of SNP markers in a nonmodel passerine bird through RAD sequencing and contig mapping to the zebra finch genome.

Bourgeois YX, Lhuillier E, Cézard T, Bertrand JA, Delahaie B, Cornuault J, Duval T, Bouchez O, Milá B, Thébaud C.

Mol Ecol Resour. 2013 Sep;13(5):899-907. doi: 10.1111/1755-0998.12137. Epub 2013 Jul 16.

PMID:
23855484
7.

Transcriptome analysis of the mud crab (Scylla paramamosain) by 454 deep sequencing: assembly, annotation, and marker discovery.

Ma H, Ma C, Li S, Jiang W, Li X, Liu Y, Ma L.

PLoS One. 2014 Jul 23;9(7):e102668. doi: 10.1371/journal.pone.0102668. eCollection 2014.

8.

PeanutDB: an integrated bioinformatics web portal for Arachis hypogaea transcriptomics.

Duan X, Schmidt E, Li P, Lenox D, Liu L, Shu C, Zhang J, Liang C.

BMC Plant Biol. 2012 Jun 19;12:94. doi: 10.1186/1471-2229-12-94.

9.

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery.

Parchman TL, Geist KS, Grahnen JA, Benkman CW, Buerkle CA.

BMC Genomics. 2010 Mar 16;11:180. doi: 10.1186/1471-2164-11-180.

10.

Sequencing and characterization of the guppy (Poecilia reticulata) transcriptome.

Fraser BA, Weadick CJ, Janowitz I, Rodd FH, Hughes KA.

BMC Genomics. 2011 Apr 20;12:202. doi: 10.1186/1471-2164-12-202.

11.

Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates.

van Oers K, Santure AW, De Cauwer I, van Bers NE, Crooijmans RP, Sheldon BC, Visser ME, Slate J, Groenen MA.

Heredity (Edinb). 2014 Mar;112(3):307-16. doi: 10.1038/hdy.2013.107. Epub 2013 Oct 23.

12.

Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types.

Guo S, Zheng Y, Joung JG, Liu S, Zhang Z, Crasta OR, Sobral BW, Xu Y, Huang S, Fei Z.

BMC Genomics. 2010 Jun 17;11:384. doi: 10.1186/1471-2164-11-384.

13.

High-utility conserved avian microsatellite markers enable parentage and population studies across a wide range of species.

Dawson DA, Ball AD, Spurgin LG, Martín-Gálvez D, Stewart IR, Horsburgh GJ, Potter J, Molina-Morales M, Bicknell AW, Preston SA, Ekblom R, Slate J, Burke T.

BMC Genomics. 2013 Mar 15;14:176. doi: 10.1186/1471-2164-14-176.

14.

Reference-free transcriptome assembly in non-model animals from next-generation sequencing data.

Cahais V, Gayral P, Tsagkogeorga G, Melo-Ferreira J, Ballenghien M, Weinert L, Chiari Y, Belkhir K, Ranwez V, Galtier N.

Mol Ecol Resour. 2012 Sep;12(5):834-45. doi: 10.1111/j.1755-0998.2012.03148.x. Epub 2012 Apr 30.

PMID:
22540679
15.

Expression profiling without genome sequence information in a non-model species, Pandalid shrimp (Pandalus latirostris), by next-generation sequencing.

Kawahara-Miki R, Wada K, Azuma N, Chiba S.

PLoS One. 2011;6(10):e26043. doi: 10.1371/journal.pone.0026043. Epub 2011 Oct 10.

16.

The development and characterization of a 60K SNP chip for chicken.

Groenen MA, Megens HJ, Zare Y, Warren WC, Hillier LW, Crooijmans RP, Vereijken A, Okimoto R, Muir WM, Cheng HH.

BMC Genomics. 2011 May 31;12(1):274. doi: 10.1186/1471-2164-12-274.

17.

De novo transcriptome analysis of Perna viridis highlights tissue-specific patterns for environmental studies.

Leung PT, Ip JC, Mak SS, Qiu JW, Lam PK, Wong CK, Chan LL, Leung KM.

BMC Genomics. 2014 Sep 19;15:804. doi: 10.1186/1471-2164-15-804.

18.

De novo assembly and characterisation of the field pea transcriptome using RNA-Seq.

Sudheesh S, Sawbridge TI, Cogan NO, Kennedy P, Forster JW, Kaur S.

BMC Genomics. 2015 Aug 16;16:611. doi: 10.1186/s12864-015-1815-7.

19.

Comprehensive analysis of Sichuan white geese (Anser cygnoides) transcriptome.

Ding N, Han Q, Li Q, Zhao X, Li J, Su J, Wang Q.

Anim Sci J. 2014 Jun;85(6):650-9. doi: 10.1111/asj.12197. Epub 2014 Apr 13.

PMID:
24725216
20.

454 pyrosequencing-based analysis of gene expression profiles in the amphipod Melita plumulosa: transcriptome assembly and toxicant induced changes.

Hook SE, Twine NA, Simpson SL, Spadaro DA, Moncuquet P, Wilkins MR.

Aquat Toxicol. 2014 Aug;153:73-88. doi: 10.1016/j.aquatox.2013.11.022. Epub 2013 Dec 12.

PMID:
24434169

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