Similar articles for PMID: 21589938

Year	Number of Results
2007	1
2008	1
2010	2
2011	8
2012	4
2013	10
2014	11
2015	10
2016	10
2017	7
2018	8
2019	10
2020	4
2021	9
2022	8
2023	5
2024	2

1

Targeted assembly of short sequence reads.

Warren RL, Holt RA. Warren RL, et al. PLoS One. 2011 May 11;6(5):e19816. doi: 10.1371/journal.pone.0019816. PLoS One. 2011. PMID: 21589938 Free PMC article.

2

RepAHR: an improved approach for de novo repeat identification by assembly of the high-frequency reads.

Liao X, Gao X, Zhang X, Wu FX, Wang J. Liao X, et al. BMC Bioinformatics. 2020 Oct 19;21(1):463. doi: 10.1186/s12859-020-03779-w. BMC Bioinformatics. 2020. PMID: 33076827 Free PMC article.

3

Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer.

Peterlongo P, Chikhi R. Peterlongo P, et al. BMC Bioinformatics. 2012 Mar 23;13:48. doi: 10.1186/1471-2105-13-48. BMC Bioinformatics. 2012. PMID: 22443449 Free PMC article.

4

Bioinformatics Basics for High-Throughput Hybridization-Based Targeted DNA Sequencing from FFPE-Derived Tumor Specimens: From Reads to Variants.

Sun S, Murray SS. Sun S, et al. Methods Mol Biol. 2019;1908:37-48. doi: 10.1007/978-1-4939-9004-7_3. Methods Mol Biol. 2019. PMID: 30649719

5

Software for pre-processing Illumina next-generation sequencing short read sequences.

Chen C, Khaleel SS, Huang H, Wu CH. Chen C, et al. Source Code Biol Med. 2014 May 3;9:8. doi: 10.1186/1751-0473-9-8. eCollection 2014. Source Code Biol Med. 2014. PMID: 24955109 Free PMC article.

6

Graph mining for next generation sequencing: leveraging the assembly graph for biological insights.

Warnke-Sommer J, Ali H. Warnke-Sommer J, et al. BMC Genomics. 2016 May 6;17:340. doi: 10.1186/s12864-016-2678-2. BMC Genomics. 2016. PMID: 27154001 Free PMC article.

7

Fast and SNP-aware short read alignment with SALT.

Quan W, Liu B, Wang Y. Quan W, et al. BMC Bioinformatics. 2021 Aug 25;22(Suppl 9):172. doi: 10.1186/s12859-021-04088-6. BMC Bioinformatics. 2021. PMID: 34433415 Free PMC article.

8

Fast and simple protein-alignment-guided assembly of orthologous gene families from microbiome sequencing reads.

Huson DH, Tappu R, Bazinet AL, Xie C, Cummings MP, Nieselt K, Williams R. Huson DH, et al. Microbiome. 2017 Jan 25;5(1):11. doi: 10.1186/s40168-017-0233-2. Microbiome. 2017. PMID: 28122610 Free PMC article.

9

De novo assembly of highly polymorphic metagenomic data using in situ generated reference sequences and a novel BLAST-based assembly pipeline.

Lin YY, Hsieh CH, Chen JH, Lu X, Kao JH, Chen PJ, Chen DS, Wang HY. Lin YY, et al. BMC Bioinformatics. 2017 Apr 26;18(1):223. doi: 10.1186/s12859-017-1630-z. BMC Bioinformatics. 2017. PMID: 28446139 Free PMC article.

10

FastEtch: A Fast Sketch-Based Assembler for Genomes.

Ghosh P, Kalyanaraman A. Ghosh P, et al. IEEE/ACM Trans Comput Biol Bioinform. 2019 Jul-Aug;16(4):1091-1106. doi: 10.1109/TCBB.2017.2737999. Epub 2017 Sep 11. IEEE/ACM Trans Comput Biol Bioinform. 2019. PMID: 28910776

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

101 results

Results by year