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Items: 1 to 20 of 95


DAS writeback: a collaborative annotation system.

Salazar GA, Jimenez RC, Garcia A, Hermjakob H, Mulder N, Blake E.

BMC Bioinformatics. 2011 May 10;12:143. doi: 10.1186/1471-2105-12-143.


MyDas, an extensible Java DAS server.

Salazar GA, García LJ, Jones P, Jimenez RC, Quinn AF, Jenkinson AM, Mulder N, Martin M, Hunter S, Hermjakob H.

PLoS One. 2012;7(9):e44180. doi: 10.1371/journal.pone.0044180. Epub 2012 Sep 13.


Annotation and visualization of endogenous retroviral sequences using the Distributed Annotation System (DAS) and eBioX.

Barrio AM, Lagercrantz E, Sperber GO, Blomberg J, Bongcam-Rudloff E.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S18. doi: 10.1186/1471-2105-10-S6-S18.


Integrating protein annotation resources through the Distributed Annotation System.

Olason PI.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W468-70.


Adding some SPICE to DAS.

Prlić A, Down TA, Hubbard TJ.

Bioinformatics. 2005 Sep 1;21 Suppl 2:ii40-1.


The distributed annotation system.

Dowell RD, Jokerst RM, Day A, Eddy SR, Stein L.

BMC Bioinformatics. 2001;2:7. Epub 2001 Oct 10.


easyDAS: automatic creation of DAS servers.

Gel Moreno B, Jenkinson AM, Jimenez RC, Messeguer Peypoch X, Hermjakob H.

BMC Bioinformatics. 2011 Jan 18;12:23. doi: 10.1186/1471-2105-12-23.


DASher: a stand-alone protein sequence client for DAS, the Distributed Annotation System.

Messina DN, Sonnhammer EL.

Bioinformatics. 2009 May 15;25(10):1333-4. doi: 10.1093/bioinformatics/btp153. Epub 2009 Mar 17.


GenExp: an interactive web-based genomic DAS client with client-side data rendering.

Gel Moreno B, Messeguer Peypoch X.

PLoS One. 2011;6(7):e21270. doi: 10.1371/journal.pone.0021270. Epub 2011 Jul 5.


Updating annotations with the distributed annotation system and the automated sequence annotation pipeline.

Speier W, Ochs MF.

Bioinformatics. 2012 Nov 1;28(21):2858-9. doi: 10.1093/bioinformatics/bts530. Epub 2012 Sep 3.


CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.

Chen X, Laudeman TW, Rushton PJ, Spraggins TA, Timko MP.

BMC Bioinformatics. 2007 Apr 19;8:129.


Extension to distributed annotation system: Summary and summaryplot commands.

Chrysostomou C, Brookes AJ.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:7655-8. doi: 10.1109/EMBC.2015.7320165.


Integrating electron microscopy information into existing Distributed Annotation Systems.

Macías JR, Jiménez-Lozano N, Carazo JM.

J Struct Biol. 2007 May;158(2):205-13. Epub 2007 Feb 24.


Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome browser.

Stenger JE, Xu H, Haynes C, Hauser ER, Pericak-Vance M, Goldschmidt-Clermont PJ, Vance JM.

BMC Bioinformatics. 2005 Apr 12;6:95.


Dasty and UniProt DAS: a perfect pair for protein feature visualization.

Jones P, Vinod N, Down T, Hackmann A, Kahari A, Kretschmann E, Quinn A, Wieser D, Hermjakob H, Apweiler R.

Bioinformatics. 2005 Jul 15;21(14):3198-9. Epub 2005 May 19.


Integrating sequence and structural biology with DAS.

Prlić A, Down TA, Kulesha E, Finn RD, Kähäri A, Hubbard TJ.

BMC Bioinformatics. 2007 Sep 12;8:333.


An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.

Camon EB, Barrell DG, Dimmer EC, Lee V, Magrane M, Maslen J, Binns D, Apweiler R.

BMC Bioinformatics. 2005;6 Suppl 1:S17. Epub 2005 May 24.


myKaryoView: a light-weight client for visualization of genomic data.

Jimenez RC, Salazar GA, Gel B, Dopazo J, Mulder N, Corpas M.

PLoS One. 2011;6(10):e26345. doi: 10.1371/journal.pone.0026345. Epub 2011 Oct 26.


GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.


GeneNotes--a novel information management software for biologists.

Hong P, Wong WH.

BMC Bioinformatics. 2005 Feb 1;6:20.

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