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Items: 1 to 20 of 62

1.

Contribution of microarray data to the advancement of knowledge on the Mycobacterium tuberculosis interactome: use of the random partial least squares approach.

Mazandu GK, Opap K, Mulder NJ.

Infect Genet Evol. 2011 Jun;11(4):725-33. doi: 10.1016/j.meegid.2011.04.012. Epub 2011 Apr 14.

PMID:
21514402
2.

Contribution of microarray data to the advancement of knowledge on the Mycobacterium tuberculosis interactome: use of the random partial least squares approach.

Mazandu GK, Opap K, Mulder NJ.

Infect Genet Evol. 2011 Jan;11(1):181-9. doi: 10.1016/j.meegid.2010.09.003. Epub 2010 Sep 17.

PMID:
20850566
3.

Differential network expression during drug and stress response.

Cabusora L, Sutton E, Fulmer A, Forst CV.

Bioinformatics. 2005 Jun 15;21(12):2898-905. Epub 2005 Apr 19.

PMID:
15840709
4.

Reconstruction of genetic association networks from microarray data: a partial least squares approach.

Pihur V, Datta S, Datta S.

Bioinformatics. 2008 Feb 15;24(4):561-8. doi: 10.1093/bioinformatics/btm640. Epub 2008 Jan 18.

PMID:
18204062
5.

Partial least squares dimension reduction for microarray gene expression data with a censored response.

Nguyen DV.

Math Biosci. 2005 Jan;193(1):119-37. Epub 2005 Jan 22.

PMID:
15681279
6.

Regulation of the Mycobacterium tuberculosis PE/PPE genes.

Voskuil MI, Schnappinger D, Rutherford R, Liu Y, Schoolnik GK.

Tuberculosis (Edinb). 2004;84(3-4):256-62.

PMID:
15207495
7.

Microarray analysis of efflux pump genes in multidrug-resistant Mycobacterium tuberculosis during stress induced by common anti-tuberculous drugs.

Gupta AK, Katoch VM, Chauhan DS, Sharma R, Singh M, Venkatesan K, Sharma VD.

Microb Drug Resist. 2010 Mar;16(1):21-8. doi: 10.1089/mdr.2009.0054.

PMID:
20001742
8.

A multivariate approach applied to microarray data for identification of genes with cell cycle-coupled transcription.

Johansson D, Lindgren P, Berglund A.

Bioinformatics. 2003 Mar 1;19(4):467-73.

PMID:
12611801
9.

Microarray analysis of the chelerythrine-induced transcriptome of Mycobacterium tuberculosis.

Liang J, Zeng F, Guo A, Liu L, Guo N, Li L, Jin J, Wu X, Liu M, Zhao D, Li Y, Jin Q, Yu L.

Curr Microbiol. 2011 Apr;62(4):1200-8. doi: 10.1007/s00284-010-9837-5. Epub 2010 Dec 19.

PMID:
21170712
10.

Computational prediction and experimental verification of novel IdeR binding sites in the upstream sequences of Mycobacterium tuberculosis open reading frames.

Prakash P, Yellaboina S, Ranjan A, Hasnain SE.

Bioinformatics. 2005 May 15;21(10):2161-6. Epub 2005 Mar 3.

PMID:
15746274
11.
12.

Analysis of the function of mycobacterial DnaJ proteins by overexpression and microarray profiling.

Stewart GR, Robertson BD, Young DB.

Tuberculosis (Edinb). 2004;84(3-4):180-7.

PMID:
15207487
13.

Integrated gene co-expression network analysis in the growth phase of Mycobacterium tuberculosis reveals new potential drug targets.

Puniya BL, Kulshreshtha D, Verma SP, Kumar S, Ramachandran S.

Mol Biosyst. 2013 Nov;9(11):2798-815. doi: 10.1039/c3mb70278b.

PMID:
24056838
14.
15.
16.

Elucidation of directionality for co-expressed genes: predicting intra-operon termination sites.

Gupta A, Maranas CD, Albert R.

Bioinformatics. 2006 Jan 15;22(2):209-14. Epub 2005 Nov 15.

PMID:
16287937
17.

Gene co-expression network topology provides a framework for molecular characterization of cellular state.

Carter SL, Brechb├╝hler CM, Griffin M, Bond AT.

Bioinformatics. 2004 Sep 22;20(14):2242-50. Epub 2004 May 6.

PMID:
15130938
18.

Hypothesis-driven approach to predict transcriptional units from gene expression data.

Steinhauser D, Junker BH, Luedemann A, Selbig J, Kopka J.

Bioinformatics. 2004 Aug 12;20(12):1928-39. Epub 2004 Mar 25.

PMID:
15044239
19.

Clustering microarray gene expression data using weighted Chinese restaurant process.

Qin ZS.

Bioinformatics. 2006 Aug 15;22(16):1988-97. Epub 2006 Jun 9.

PMID:
16766561
20.

Novel insights into the genetics, biochemistry, and immunocytochemistry of the 30-kilodalton major extracellular protein of Mycobacterium tuberculosis.

Harth G, Lee BY, Wang J, Clemens DL, Horwitz MA.

Infect Immun. 1996 Aug;64(8):3038-47. Erratum in: Infect Immun 1997 Feb;65(2):852.

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