Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 108

1.

Wheat hybridization and polyploidization results in deregulation of small RNAs.

Kenan-Eichler M, Leshkowitz D, Tal L, Noor E, Melamed-Bessudo C, Feldman M, Levy AA.

Genetics. 2011 Jun;188(2):263-72. doi: 10.1534/genetics.111.128348. Epub 2011 Apr 5.

2.

Widespread, abundant, and diverse TE-associated siRNAs in developing wheat grain.

Sun F, Guo W, Du J, Ni Z, Sun Q, Yao Y.

Gene. 2013 Jun 10;522(1):1-7. doi: 10.1016/j.gene.2013.03.101. Epub 2013 Apr 2.

PMID:
23562726
3.

The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs.

Nuthikattu S, McCue AD, Panda K, Fultz D, DeFraia C, Thomas EN, Slotkin RK.

Plant Physiol. 2013 May;162(1):116-31. doi: 10.1104/pp.113.216481. Epub 2013 Mar 29.

4.

The role of small RNAs in wide hybridisation and allopolyploidisation between Brassica rapa and Brassica nigra.

Ghani MA, Li J, Rao L, Raza MA, Cao L, Yu N, Zou X, Chen L.

BMC Plant Biol. 2014 Oct 19;14:272. doi: 10.1186/s12870-014-0272-9.

5.

Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids.

Ha M, Lu J, Tian L, Ramachandran V, Kasschau KD, Chapman EJ, Carrington JC, Chen X, Wang XJ, Chen ZJ.

Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17835-40. doi: 10.1073/pnas.0907003106. Epub 2009 Oct 5.

6.

Dual coding of siRNAs and miRNAs by plant transposable elements.

Piriyapongsa J, Jordan IK.

RNA. 2008 May;14(5):814-21. doi: 10.1261/rna.916708. Epub 2008 Mar 26.

7.

Role of transposon-derived small RNAs in the interplay between genomes and parasitic DNA in rice.

Nosaka M, Itoh J, Nagato Y, Ono A, Ishiwata A, Sato Y.

PLoS Genet. 2012 Sep;8(9):e1002953. doi: 10.1371/journal.pgen.1002953. Epub 2012 Sep 27.

8.

Genome-wide identification of genes regulated in trans by transposable element small interfering RNAs.

McCue AD, Nuthikattu S, Slotkin RK.

RNA Biol. 2013 Aug;10(8):1379-95. doi: 10.4161/rna.25555. Epub 2013 Jul 2.

9.

Big roles for small RNAs in polyploidy, hybrid vigor, and hybrid incompatibility.

Ng DW, Lu J, Chen ZJ.

Curr Opin Plant Biol. 2012 Apr;15(2):154-61. doi: 10.1016/j.pbi.2012.01.007. Epub 2012 Feb 9. Review.

PMID:
22326630
10.

Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina.

Parisod C, Salmon A, Zerjal T, Tenaillon M, Grandbastien MA, Ainouche M.

New Phytol. 2009 Dec;184(4):1003-15. doi: 10.1111/j.1469-8137.2009.03029.x. Epub 2009 Sep 23.

11.

ARGONAUTE 6 bridges transposable element mRNA-derived siRNAs to the establishment of DNA methylation.

McCue AD, Panda K, Nuthikattu S, Choudury SG, Thomas EN, Slotkin RK.

EMBO J. 2015 Jan 2;34(1):20-35. doi: 10.15252/embj.201489499. Epub 2014 Nov 11.

12.
13.

Autotetraploid rice methylome analysis reveals methylation variation of transposable elements and their effects on gene expression.

Zhang J, Liu Y, Xia EH, Yao QY, Liu XD, Gao LZ.

Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):E7022-9. doi: 10.1073/pnas.1515170112. Epub 2015 Nov 30.

14.

Genetic mechanisms of allopolyploid speciation through hybrid genome doubling: novel insights from wheat (Triticum and Aegilops) studies.

Matsuoka Y, Takumi S, Nasuda S.

Int Rev Cell Mol Biol. 2014;309:199-258. doi: 10.1016/B978-0-12-800255-1.00004-1. Review.

PMID:
24529724
15.

Characterization of small RNAs and their target genes in wheat seedlings using sequencing-based approaches.

Li YF, Zheng Y, Jagadeeswaran G, Sunkar R.

Plant Sci. 2013 Apr;203-204:17-24. doi: 10.1016/j.plantsci.2012.12.014. Epub 2013 Jan 3.

PMID:
23415324
16.
17.

Updating of transposable element annotations from large wheat genomic sequences reveals diverse activities and gene associations.

Sabot F, Guyot R, Wicker T, Chantret N, Laubin B, Chalhoub B, Leroy P, Sourdille P, Bernard M.

Mol Genet Genomics. 2005 Sep;274(2):119-30. Epub 2005 Oct 11.

PMID:
16034625
18.

Expression of the rice microRNA miR820 is associated with epigenetic modifications at its own locus.

Nosaka M, Ono A, Ishiwata A, Shimizu-Sato S, Ishimoto K, Noda Y, Sato Y.

Genes Genet Syst. 2013;88(2):105-12.

19.

Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata.

Hollister JD, Smith LM, Guo YL, Ott F, Weigel D, Gaut BS.

Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2322-7. doi: 10.1073/pnas.1018222108. Epub 2011 Jan 20.

20.

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs.

Kuang H, Padmanabhan C, Li F, Kamei A, Bhaskar PB, Ouyang S, Jiang J, Buell CR, Baker B.

Genome Res. 2009 Jan;19(1):42-56. doi: 10.1101/gr.078196.108. Epub 2008 Nov 26.

Supplemental Content

Support Center