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Items: 1 to 20 of 73

1.

Long signaling cascades tend to attenuate retroactivity.

Ossareh HR, Ventura AC, Merajver SD, Del Vecchio D.

Biophys J. 2011 Apr 6;100(7):1617-26. doi: 10.1016/j.bpj.2011.02.014.

2.

Signaling cascades transmit information downstream and upstream but unlikely simultaneously.

Catozzi S, Di-Bella JP, Ventura AC, Sepulchre JA.

BMC Syst Biol. 2016 Aug 25;10(1):84. doi: 10.1186/s12918-016-0303-2.

3.

Kinase inhibitors can produce off-target effects and activate linked pathways by retroactivity.

Wynn ML, Ventura AC, Sepulchre JA, GarcĂ­a HJ, Merajver SD.

BMC Syst Biol. 2011 Oct 4;5:156. doi: 10.1186/1752-0509-5-156.

4.

Retroactive signaling in short signaling pathways.

Sepulchre JA, Merajver SD, Ventura AC.

PLoS One. 2012;7(7):e40806. doi: 10.1371/journal.pone.0040806. Epub 2012 Jul 26.

5.

Open cascades as simple solutions to providing ultrasensitivity and adaptation in cellular signaling.

Srividhya J, Li Y, Pomerening JR.

Phys Biol. 2011 Aug;8(4):046005. doi: 10.1088/1478-3975/8/4/046005. Epub 2011 May 12.

6.

Signaling cascades: consequences of varying substrate and phosphatase levels.

Feliu E, Knudsen M, Wiuf C.

Adv Exp Med Biol. 2012;736:81-94. doi: 10.1007/978-1-4419-7210-1_4.

PMID:
22161323
7.

Signaling Architectures that Transmit Unidirectional Information Despite Retroactivity.

Shah R, Del Vecchio D.

Biophys J. 2017 Aug 8;113(3):728-742. doi: 10.1016/j.bpj.2017.06.019.

8.

Noise propagation in two-step series MAPK cascade.

Dhananjaneyulu V, Sagar P VN, Kumar G, Viswanathan GA.

PLoS One. 2012;7(5):e35958. doi: 10.1371/journal.pone.0035958. Epub 2012 May 1.

9.

Robust global sensitivity in multiple enzyme cascade system explains how the downstream cascade structure may remain unaffected by cross-talk.

Mutalik VK, Singh AP, Edwards JS, Venkatesh KV.

FEBS Lett. 2004 Jan 30;558(1-3):79-84. Erratum in: FEBS Lett. 2005 Jan 3;579(1):292-3.

10.

The effects of time delays in a phosphorylation-dephosphorylation pathway.

Srividhya J, Gopinathan MS, Schnell S.

Biophys Chem. 2007 Feb;125(2-3):286-97. Epub 2006 Oct 2.

PMID:
17014949
11.

Goldbeter-Koshland model for open signaling cascades: a mathematical study.

Li Y, Srividhya J.

J Math Biol. 2010 Dec;61(6):781-803. doi: 10.1007/s00285-009-0322-3. Epub 2010 Jan 6.

PMID:
20052474
12.

Modular cell biology: retroactivity and insulation.

Del Vecchio D, Ninfa AJ, Sontag ED.

Mol Syst Biol. 2008;4:161. doi: 10.1038/msb4100204. Epub 2008 Feb 12.

13.

Energy consumption in a cyclic phosphorylation/dephosphorylation cascade.

Shacter E, Chock PB, Stadtman ER.

J Biol Chem. 1984 Oct 10;259(19):12260-4.

14.

The MAP kinase signaling cascades: a system of hundreds of components regulates a diverse array of physiological functions.

Keshet Y, Seger R.

Methods Mol Biol. 2010;661:3-38. doi: 10.1007/978-1-60761-795-2_1. Review.

PMID:
20811974
15.

Signaling cascades modulate the speed of signal propagation through space.

Govern CC, Chakraborty AK.

PLoS One. 2009;4(2):e4639. doi: 10.1371/journal.pone.0004639. Epub 2009 Feb 27.

16.
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Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades.

Markevich NI, Hoek JB, Kholodenko BN.

J Cell Biol. 2004 Feb 2;164(3):353-9. Epub 2004 Jan 26.

19.

A kinetic model of ERK cyclic pathway on substrate control.

Hirashima T.

Math Biosci. 2012 Oct;239(2):207-12. doi: 10.1016/j.mbs.2012.05.011. Epub 2012 Jun 13.

PMID:
22705338
20.

On the number of steady states in a multiple futile cycle.

Wang L, Sontag ED.

J Math Biol. 2008 Jul;57(1):29-52. Epub 2007 Nov 16.

PMID:
18008071

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