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Items: 1 to 20 of 165

1.

Validating transcripts with probes and imaging technology.

Itzkovitz S, van Oudenaarden A.

Nat Methods. 2011 Apr;8(4 Suppl):S12-9. doi: 10.1038/nmeth.1573. Epub 2011 Mar 30. Review.

2.

Multiplex detection of RNA expression in Drosophila embryos.

Kosman D, Mizutani CM, Lemons D, Cox WG, McGinnis W, Bier E.

Science. 2004 Aug 6;305(5685):846.

3.

Single-molecule resolution fluorescent in situ hybridization (smFISH) in the yeast S. cerevisiae.

Rahman S, Zenklusen D.

Methods Mol Biol. 2013;1042:33-46. doi: 10.1007/978-1-62703-526-2_3.

PMID:
23979998
4.

RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells.

Chen KH, Boettiger AN, Moffitt JR, Wang S, Zhuang X.

Science. 2015 Apr 24;348(6233):aaa6090. doi: 10.1126/science.aaa6090. Epub 2015 Apr 9.

5.

Multicolor fluorescent in situ mRNA hybridization (FISH) on whole mounts and sections.

Lea R, Bonev B, Dubaissi E, Vize PD, Papalopulu N.

Methods Mol Biol. 2012;917:431-44. doi: 10.1007/978-1-61779-992-1_24.

PMID:
22956102
6.
7.

Allele-specific detection of single mRNA molecules in situ.

Hansen CH, van Oudenaarden A.

Nat Methods. 2013 Sep;10(9):869-71. doi: 10.1038/nmeth.2601. Epub 2013 Aug 11.

8.

MERFISHing for spatial context.

Shalek AK, Satija R.

Trends Immunol. 2015 Jul;36(7):390-1. doi: 10.1016/j.it.2015.05.002. Epub 2015 May 23.

PMID:
26013647
9.

High-resolution fluorescence in situ hybridization to detect mRNAs in neuronal compartments in vitro and in vivo.

Swanger SA, Bassell GJ, Gross C.

Methods Mol Biol. 2011;714:103-23. doi: 10.1007/978-1-61779-005-8_7.

PMID:
21431737
10.

Single-cell systems biology by super-resolution imaging and combinatorial labeling.

Lubeck E, Cai L.

Nat Methods. 2012 Jun 3;9(7):743-8. doi: 10.1038/nmeth.2069.

11.

RNA Imaging with Multiplexed Error-Robust Fluorescence In Situ Hybridization (MERFISH).

Moffitt JR, Zhuang X.

Methods Enzymol. 2016;572:1-49. doi: 10.1016/bs.mie.2016.03.020. Epub 2016 Apr 27.

12.

Expression profiling. Combinatorial labeling of single cells for gene expression cytometry.

Fan HC, Fu GK, Fodor SP.

Science. 2015 Feb 6;347(6222):1258367. doi: 10.1126/science.1258367.

13.

Detection of mRNA expression patterns by nonradioactive in situ hybridization on histological sections of floral tissue.

Medzihradszky A, Schneitz K, Lohmann JU.

Methods Mol Biol. 2014;1110:275-93. doi: 10.1007/978-1-4614-9408-9_14.

PMID:
24395263
14.

RNA detection in situ with FISH-STICs.

Sinnamon JR, Czaplinski K.

RNA. 2014 Feb;20(2):260-6. doi: 10.1261/rna.041905.113. Epub 2013 Dec 17.

15.

Profiling the transcriptome with RNA SPOTs.

Eng CL, Shah S, Thomassie J, Cai L.

Nat Methods. 2017 Dec;14(12):1153-1155. doi: 10.1038/nmeth.4500. Epub 2017 Nov 13.

PMID:
29131163
16.

Quantitative gene expression analysis in Caenorhabditis elegans using single molecule RNA FISH.

Bolková J, Lanctôt C.

Methods. 2016 Apr 1;98:42-49. doi: 10.1016/j.ymeth.2015.11.008. Epub 2015 Nov 10.

PMID:
26564238
17.

Radioactive in situ hybridization for detecting diverse gene expression patterns in tissue.

Chen CC, Wada K, Jarvis ED.

J Vis Exp. 2012 Apr 27;(62). pii: 3764. doi: 10.3791/3764.

18.

Simultaneous detection of nuclear and cytoplasmic RNA variants utilizing Stellaris® RNA fluorescence in situ hybridization in adherent cells.

Coassin SR, Orjalo AV Jr, Semaan SJ, Johansson HE.

Methods Mol Biol. 2014;1211:189-99. doi: 10.1007/978-1-4939-1459-3_15.

PMID:
25218386
19.

FISH-Flow, a protocol for the concurrent detection of mRNA and protein in single cells using fluorescence in situ hybridization and flow cytometry.

Arrigucci R, Bushkin Y, Radford F, Lakehal K, Vir P, Pine R, Martin D, Sugarman J, Zhao Y, Yap GS, Lardizabal AA, Tyagi S, Gennaro ML.

Nat Protoc. 2017 Jun;12(6):1245-1260. doi: 10.1038/nprot.2017.039. Epub 2017 May 18.

20.

A quick and simple FISH protocol with hybridization-sensitive fluorescent linear oligodeoxynucleotide probes.

Wang DO, Matsuno H, Ikeda S, Nakamura A, Yanagisawa H, Hayashi Y, Okamoto A.

RNA. 2012 Jan;18(1):166-75. doi: 10.1261/rna.028431.111. Epub 2011 Nov 18.

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