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Items: 1 to 20 of 95

1.

In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry.

Rees JS, Lowe N, Armean IM, Roote J, Johnson G, Drummond E, Spriggs H, Ryder E, Russell S, St Johnston D, Lilley KS.

Mol Cell Proteomics. 2011 Jun;10(6):M110.002386. doi: 10.1074/mcp.M110.002386.

2.

Identifying specific protein interaction partners using quantitative mass spectrometry and bead proteomes.

Trinkle-Mulcahy L, Boulon S, Lam YW, Urcia R, Boisvert FM, Vandermoere F, Morrice NA, Swift S, Rothbauer U, Leonhardt H, Lamond A.

J Cell Biol. 2008 Oct 20;183(2):223-39. doi: 10.1083/jcb.200805092.

3.

Affinity purification of protein complexes from Drosophila embryos in cell cycle studies.

Lipinszki Z, Wang P, Grant R, Lindon C, Dzhindzhev NS, D'Avino PP, Przewloka MR, Glover DM, Archambault V.

Methods Mol Biol. 2014;1170:571-88. doi: 10.1007/978-1-4939-0888-2_33.

PMID:
24906338
4.

SILAC-iPAC: a quantitative method for distinguishing genuine from non-specific components of protein complexes by parallel affinity capture.

Rees JS, Lilley KS, Jackson AP.

J Proteomics. 2015 Feb 6;115:143-56. doi: 10.1016/j.jprot.2014.12.006.

5.

The monitoring and affinity purification of proteins using dual tags with tetracysteine motifs.

Giannone RJ, Liu Y, Wang Y.

Methods Mol Biol. 2009;544:421-38. doi: 10.1007/978-1-59745-483-4_28.

PMID:
19488716
6.

Analyzing protein complexes in Drosophila with tandem affinity purification-mass spectrometry.

Veraksa A, Bauer A, Artavanis-Tsakonas S.

Dev Dyn. 2005 Mar;232(3):827-34.

7.

A versatile lentiviral expression system to identify mammalian protein-protein interactions.

Mak AB, Moffat J.

Methods. 2012 Aug;57(4):409-16. doi: 10.1016/j.ymeth.2012.06.005. Review.

PMID:
22713554
8.

Drosophila melanogaster larval hemolymph protein mapping.

Guedes Sde M, Vitorino R, Tomer K, Domingues MR, Correia AJ, Amado F, Domingues P.

Biochem Biophys Res Commun. 2003 Dec 19;312(3):545-54.

PMID:
14680800
9.

Method for suppressing non-specific protein interactions observed with affinity resins.

Rees JS, Lilley KS.

Methods. 2011 Aug;54(4):407-12. doi: 10.1016/j.ymeth.2011.06.004.

PMID:
21722733
10.

Sequential peptide affinity purification system for the systematic isolation and identification of protein complexes from Escherichia coli.

Babu M, Butland G, Pogoutse O, Li J, Greenblatt JF, Emili A.

Methods Mol Biol. 2009;564:373-400. doi: 10.1007/978-1-60761-157-8_22.

PMID:
19544035
11.

A protein complex network of Drosophila melanogaster.

Guruharsha KG, Rual JF, Zhai B, Mintseris J, Vaidya P, Vaidya N, Beekman C, Wong C, Rhee DY, Cenaj O, McKillip E, Shah S, Stapleton M, Wan KH, Yu C, Parsa B, Carlson JW, Chen X, Kapadia B, VijayRaghavan K, Gygi SP, Celniker SE, Obar RA, Artavanis-Tsakonas S.

Cell. 2011 Oct 28;147(3):690-703. doi: 10.1016/j.cell.2011.08.047.

12.

Tandem affinity purification of protein complexes from mammalian cells by the Strep/FLAG (SF)-TAP tag.

Gloeckner CJ, Boldt K, Schumacher A, Ueffing M.

Methods Mol Biol. 2009;564:359-72. doi: 10.1007/978-1-60761-157-8_21.

PMID:
19544034
13.

Deciphering protein complexes and protein interaction networks by tandem affinity purification and mass spectrometry: analytical perspective.

Shevchenko A, Schaft D, Roguev A, Pijnappel WW, Stewart AF, Shevchenko A.

Mol Cell Proteomics. 2002 Mar;1(3):204-12.

14.

Identification of protein interacting partners using tandem affinity purification.

Bailey D, Urena L, Thorne L, Goodfellow I.

J Vis Exp. 2012 Feb 25;(60). pii: 3643. doi: 10.3791/3643.

15.

Analysis of the heterochromatin protein 1 (HP1) interactome in Drosophila.

Ryu HW, Lee DH, Florens L, Swanson SK, Washburn MP, Kwon SH.

J Proteomics. 2014 May 6;102:137-47. doi: 10.1016/j.jprot.2014.03.016.

PMID:
24681131
16.

Assignment of protein interactions from affinity purification/mass spectrometry data.

Pardo M, Choudhary JS.

J Proteome Res. 2012 Mar 2;11(3):1462-74. doi: 10.1021/pr2011632. Review.

PMID:
22283744
17.

Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library.

Lowe N, Rees JS, Roote J, Ryder E, Armean IM, Johnson G, Drummond E, Spriggs H, Drummond J, Magbanua JP, Naylor H, Sanson B, Bastock R, Huelsmann S, Trovisco V, Landgraf M, Knowles-Barley S, Armstrong JD, White-Cooper H, Hansen C, Phillips RG; UK Drosophila Protein Trap Screening Consortium., Lilley KS, Russell S, St Johnston D.

Development. 2014 Oct;141(20):3994-4005. doi: 10.1242/dev.111054.

18.

Quantitative proteomic analysis of protein complexes: concurrent identification of interactors and their state of phosphorylation.

Pflieger D, Jünger MA, Müller M, Rinner O, Lee H, Gehrig PM, Gstaiger M, Aebersold R.

Mol Cell Proteomics. 2008 Feb;7(2):326-46.

19.
20.

Analysis of the STAT3 interactome using in-situ biotinylation and SILAC.

Blumert C, Kalkhof S, Brocke-Heidrich K, Kohajda T, von Bergen M, Horn F.

J Proteomics. 2013 Dec 6;94:370-86. doi: 10.1016/j.jprot.2013.08.021.

PMID:
24013128
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