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Items: 1 to 20 of 72

1.

RESOLVING CLUSTERED WORMS VIA PROBABILISTIC SHAPE MODELS.

Wählby C, Riklin-Raviv T, Ljosa V, Conery AL, Golland P, Ausubel FM, Carpenter AE.

Proc IEEE Int Symp Biomed Imaging. 2010 Jun 21;2010(14-17 April 2010):552-555.

2.

Morphology-guided graph search for untangling objects: C. elegans analysis.

Raviv TR, Ljosa V, Conery AL, Ausubel FM, Carpenter AE, Golland P, Wählby C.

Med Image Comput Comput Assist Interv. 2010;13(Pt 3):634-41.

3.

Automatic identification of Caenorhabditis elegans in population images by shape energy features.

Ochoa D, Gautama S, Philips W.

J Microsc. 2010 May;238(2):173-84. doi: 10.1111/j.1365-2818.2009.03339.x.

4.

A microfluidic diode for sorting and immobilization of Caenorhabditis elegans.

Yang L, Hong T, Zhang Y, Arriola JGS, Nelms BL, Mu R, Li D.

Biomed Microdevices. 2017 Jun;19(2):38. doi: 10.1007/s10544-017-0175-2.

PMID:
28466284
5.

Quantitative and automated high-throughput genome-wide RNAi screens in C. elegans.

Squiban B, Belougne J, Ewbank J, Zugasti O.

J Vis Exp. 2012 Feb 27;(60). pii: 3448. doi: 10.3791/3448.

6.

An automated microfluidic platform for calcium imaging of chemosensory neurons in Caenorhabditis elegans.

Chokshi TV, Bazopoulou D, Chronis N.

Lab Chip. 2010 Oct 21;10(20):2758-63. doi: 10.1039/c004658b. Epub 2010 Sep 1.

PMID:
20820480
7.

Automated cellular annotation for high-resolution images of adult Caenorhabditis elegans.

Aerni SJ, Liu X, Do CB, Gross SS, Nguyen A, Guo SD, Long F, Peng H, Kim SS, Batzoglou S.

Bioinformatics. 2013 Jul 1;29(13):i18-26. doi: 10.1093/bioinformatics/btt223.

8.

Model-based approach for tracking embryogenesis in Caenorhabditis elegans fluorescence microscopy data.

Dzyubachyk O, Jelier R, Lehner B, Niessen W, Meijering E.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:5356-9. doi: 10.1109/IEMBS.2009.5334046.

PMID:
19964674
9.

Straightening Caenorhabditis elegans images.

Peng H, Long F, Liu X, Kim SK, Myers EW.

Bioinformatics. 2008 Jan 15;24(2):234-42. Epub 2007 Nov 19.

10.

Automated on-chip rapid microscopy, phenotyping and sorting of C. elegans.

Chung K, Crane MM, Lu H.

Nat Methods. 2008 Jul;5(7):637-43. doi: 10.1038/nmeth.1227. Epub 2008 Jun 22.

PMID:
18568029
11.

Automated quantification of synaptic fluorescence in C. elegans.

Sturt BL, Bamber BA.

J Vis Exp. 2012 Aug 10;(66). pii: 4090. doi: 10.3791/4090.

12.

A novel computational approach for simultaneous tracking and feature extraction of C. elegans populations in fluid environments.

Tsechpenakis G, Bianchi L, Metaxas D, Driscoll M.

IEEE Trans Biomed Eng. 2008 May;55(5):1539-49. doi: 10.1109/TBME.2008.918582.

PMID:
18440900
13.

Continuous-flow C. elegans fluorescence expression analysis with real-time image processing through microfluidics.

Yan Y, Boey D, Ng LT, Gruber J, Bettiol A, Thakor NV, Chen CH.

Biosens Bioelectron. 2016 Mar 15;77:428-34. doi: 10.1016/j.bios.2015.09.045. Epub 2015 Sep 28.

PMID:
26452079
14.

Medical image segmentation via atlases and fuzzy object models: Improving efficacy through optimum object search and fewer models.

Phellan R, Falcão AX, Udupa JK.

Med Phys. 2016 Jan;43(1):401. doi: 10.1118/1.4938577.

PMID:
26745933
15.
16.

Caenorhabditis elegans segmentation using texture-based models for motility phenotyping.

Greenblum A, Sznitman R, Fua P, Arratia PE, Sznitman J.

IEEE Trans Biomed Eng. 2014 Aug;61(8):2278-89. doi: 10.1109/TBME.2014.2298612.

PMID:
25051545
17.

Computer vision for high content screening.

Kraus OZ, Frey BJ.

Crit Rev Biochem Mol Biol. 2016;51(2):102-9. doi: 10.3109/10409238.2015.1135868. Epub 2016 Jan 24. Review.

PMID:
26806341
18.

Maze exploration and learning in C. elegans.

Qin J, Wheeler AR.

Lab Chip. 2007 Feb;7(2):186-92. Epub 2006 Dec 1.

PMID:
17268620
19.

Versatile size-dependent sorting of C. elegans nematodes and embryos using a tunable microfluidic filter structure.

Dong L, Cornaglia M, Lehnert T, Gijs MA.

Lab Chip. 2016 Feb 7;16(3):574-85. doi: 10.1039/c5lc01328c.

PMID:
26755420
20.

High-throughput screening and biosensing with fluorescent C. elegans strains.

Leung CK, Deonarine A, Strange K, Choe KP.

J Vis Exp. 2011 May 19;(51). pii: 2745. doi: 10.3791/2745.

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