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Items: 1 to 20 of 76

1.

Plant centromeric retrotransposons: a structural and cytogenetic perspective.

Neumann P, Navrátilová A, Koblížková A, Kejnovský E, Hřibová E, Hobza R, Widmer A, Doležel J, Macas J.

Mob DNA. 2011 Mar 3;2(1):4. doi: 10.1186/1759-8753-2-4.

2.

Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain.

Weber B, Schmidt T.

Chromosome Res. 2009;17(3):379-96. doi: 10.1007/s10577-009-9029-y. Epub 2009 Mar 26.

PMID:
19322668
3.

Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration.

Weber B, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T.

Mob DNA. 2013 Mar 1;4(1):8. doi: 10.1186/1759-8753-4-8.

4.

Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice.

Nagaki K, Neumann P, Zhang D, Ouyang S, Buell CR, Cheng Z, Jiang J.

Mol Biol Evol. 2005 Apr;22(4):845-55. Epub 2004 Dec 22.

5.

Retrotransposon-related DNA sequences in the centromeres of grass chromosomes.

Miller JT, Dong F, Jackson SA, Song J, Jiang J.

Genetics. 1998 Dec;150(4):1615-23.

6.

[Chromosomal organization of centromeric Ty3/gypsy retrotransposons in Allium cepa L. and Allium fistulosum L].

Kiseleva AV, Kirov IV, Khrustaleva LI.

Genetika. 2014 Jun;50(6):670-6. Russian.

PMID:
25715457
7.

Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres.

Nagaki K, Song J, Stupar RM, Parokonny AS, Yuan Q, Ouyang S, Liu J, Hsiao J, Jones KM, Dawe RK, Buell CR, Jiang J.

Genetics. 2003 Feb;163(2):759-70.

8.

The large-scale organization of the centromeric region in Beta species.

Gindullis F, Desel C, Galasso I, Schmidt T.

Genome Res. 2001 Feb;11(2):253-65.

9.

Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison.

Du J, Tian Z, Hans CS, Laten HM, Cannon SB, Jackson SA, Shoemaker RC, Ma J.

Plant J. 2010 Aug;63(4):584-98. doi: 10.1111/j.1365-313X.2010.04263.x.

10.

A lineage-specific centromere retrotransposon in Oryza brachyantha.

Gao D, Gill N, Kim HR, Walling JG, Zhang W, Fan C, Yu Y, Ma J, SanMiguel P, Jiang N, Cheng Z, Wing RA, Jiang J, Jackson SA.

Plant J. 2009 Dec;60(5):820-31. doi: 10.1111/j.1365-313X.2009.04005.x. Epub 2009 Aug 21.

11.

Genome-wide characterization of long terminal repeat -retrotransposons in apple reveals the differences in heterogeneity and copy number between Ty1-copia and Ty3-gypsy retrotransposons.

Sun HY, Dai HY, Zhao GL, Ma Y, Ou CQ, Li H, Li LG, Zhang ZH.

J Integr Plant Biol. 2008 Sep;50(9):1130-9. doi: 10.1111/j.1744-7909.2008.00717.x.

PMID:
18844781
12.

Divergence in centromere structure distinguishes related genomes in Coix lacryma-jobi and its wild relative.

Han Y, Wang G, Liu Z, Liu J, Yue W, Song R, Zhang X, Jin W.

Chromosoma. 2010 Feb;119(1):89-98. doi: 10.1007/s00412-009-0239-z. Epub 2009 Sep 8.

PMID:
19756690
13.

Structure and dynamics of retrotransposons at wheat centromeres and pericentromeres.

Liu Z, Yue W, Li D, Wang RR, Kong X, Lu K, Wang G, Dong Y, Jin W, Zhang X.

Chromosoma. 2008 Oct;117(5):445-56. doi: 10.1007/s00412-008-0161-9. Epub 2008 May 22.

PMID:
18496705
14.

A Ty3/gypsy retrotransposon-like sequence localizes to the centromeric regions of cereal chromosomes.

Presting GG, Malysheva L, Fuchs J, Schubert I.

Plant J. 1998 Dec;16(6):721-8.

15.

Centromeric retrotransposon lineages predate the maize/rice divergence and differ in abundance and activity.

Sharma A, Presting GG.

Mol Genet Genomics. 2008 Feb;279(2):133-47. Epub 2007 Nov 14.

PMID:
18000683
16.
17.

A molecular view of plant centromeres.

Jiang J, Birchler JA, Parrott WA, Dawe RK.

Trends Plant Sci. 2003 Dec;8(12):570-5. Review.

PMID:
14659705
18.

Characterization of the centromere and peri-centromere retrotransposons in Brassica rapa and their distribution in related Brassica species.

Lim KB, Yang TJ, Hwang YJ, Kim JS, Park JY, Kwon SJ, Kim J, Choi BS, Lim MH, Jin M, Kim HI, de Jong H, Bancroft I, Lim Y, Park BS.

Plant J. 2007 Jan;49(2):173-83. Epub 2006 Dec 6. Erratum in: Plant J. 2007 Feb;49(4):765.

19.

Identification and characterization of jute LTR retrotransposons:: Their abundance, heterogeneity and transcriptional activity.

Ahmed S, Shafiuddin M, Azam MS, Islam MS, Ghosh A, Khan H.

Mob Genet Elements. 2011 May;1(1):18-28.

20.

The compact Brachypodium genome conserves centromeric regions of a common ancestor with wheat and rice.

Qi L, Friebe B, Wu J, Gu Y, Qian C, Gill BS.

Funct Integr Genomics. 2010 Nov;10(4):477-92. doi: 10.1007/s10142-010-0190-3. Epub 2010 Sep 15.

PMID:
20842403
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