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Items: 1 to 20 of 118

1.

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila.

Pandey RV, Kofler R, Orozco-terWengel P, Nolte V, Schlötterer C.

BMC Genet. 2011 Mar 2;12:27. doi: 10.1186/1471-2156-12-27.

2.

SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.

Dereeper A, Nicolas S, Le Cunff L, Bacilieri R, Doligez A, Peros JP, Ruiz M, This P.

BMC Bioinformatics. 2011 May 5;12:134. doi: 10.1186/1471-2105-12-134.

3.

PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals.

Kofler R, Orozco-terWengel P, De Maio N, Pandey RV, Nolte V, Futschik A, Kosiol C, Schlötterer C.

PLoS One. 2011 Jan 6;6(1):e15925. doi: 10.1371/journal.pone.0015925.

4.

FlyBase : a database for the Drosophila research community.

Drysdale R; FlyBase Consortium.

Methods Mol Biol. 2008;420:45-59. doi: 10.1007/978-1-59745-583-1_3. Review.

PMID:
18641940
5.

FlyBase: integration and improvements to query tools.

Wilson RJ, Goodman JL, Strelets VB; FlyBase Consortium.

Nucleic Acids Res. 2008 Jan;36(Database issue):D588-93. Epub 2007 Dec 26.

6.

The FlyBase database of the Drosophila genome projects and community literature.

FlyBase Consortium.

Nucleic Acids Res. 2002 Jan 1;30(1):106-8.

7.

RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks.

An J, Lai J, Wood DL, Sajjanhar A, Wang C, Tevz G, Lehman ML, Nelson CC.

BMC Genomics. 2015 Mar 1;16:145. doi: 10.1186/s12864-015-1346-2.

8.

The FlyBase database of the Drosophila genome projects and community literature.

FlyBase Consortium.

Nucleic Acids Res. 2003 Jan 1;31(1):172-5.

9.

Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics.

Sakai H, Lee SS, Tanaka T, Numa H, Kim J, Kawahara Y, Wakimoto H, Yang CC, Iwamoto M, Abe T, Yamada Y, Muto A, Inokuchi H, Ikemura T, Matsumoto T, Sasaki T, Itoh T.

Plant Cell Physiol. 2013 Feb;54(2):e6. doi: 10.1093/pcp/pcs183. Epub 2013 Jan 7.

10.

An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases.

Yang JO, Hwang S, Oh J, Bhak J, Sohn TK.

BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S19. doi: 10.1186/1471-2105-9-S12-S19.

11.

MouseIndelDB: a database integrating genomic indel polymorphisms that distinguish mouse strains.

Akagi K, Stephens RM, Li J, Evdokimov E, Kuehn MR, Volfovsky N, Symer DE.

Nucleic Acids Res. 2010 Jan;38(Database issue):D600-6. doi: 10.1093/nar/gkp1046. Epub 2009 Nov 20.

12.

EvoSNP-DB: A database of genetic diversity in East Asian populations.

Kim YU, Kim YJ, Lee JY, Park K.

BMB Rep. 2013 Aug;46(8):416-21.

13.

ESTree db: a tool for peach functional genomics.

Lazzari B, Caprera A, Vecchietti A, Stella A, Milanesi L, Pozzi C.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S16.

14.

FLYSNPdb: a high-density SNP database of Drosophila melanogaster.

Chen D, Berger J, Fellner M, Suzuki T.

Nucleic Acids Res. 2009 Jan;37(Database issue):D567-70. doi: 10.1093/nar/gkn583. Epub 2008 Sep 10.

15.

SynTView - an interactive multi-view genome browser for next-generation comparative microorganism genomics.

Lechat P, Souche E, Moszer I.

BMC Bioinformatics. 2013 Sep 22;14:277. doi: 10.1186/1471-2105-14-277.

16.

FlyBase 102--advanced approaches to interrogating FlyBase.

St Pierre SE, Ponting L, Stefancsik R, McQuilton P; FlyBase Consortium.

Nucleic Acids Res. 2014 Jan;42(Database issue):D780-8. doi: 10.1093/nar/gkt1092. Epub 2013 Nov 13.

17.

FlyBase 101--the basics of navigating FlyBase.

McQuilton P, St Pierre SE, Thurmond J; FlyBase Consortium.

Nucleic Acids Res. 2012 Jan;40(Database issue):D706-14. doi: 10.1093/nar/gkr1030. Epub 2011 Nov 29.

18.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

19.

Snat: a SNP annotation tool for bovine by integrating various sources of genomic information.

Jiang J, Jiang L, Zhou B, Fu W, Liu JF, Zhang Q.

BMC Genet. 2011 Oct 7;12:85. doi: 10.1186/1471-2156-12-85.

20.

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.

dos Santos G, Schroeder AJ, Goodman JL, Strelets VB, Crosby MA, Thurmond J, Emmert DB, Gelbart WM; FlyBase Consortium.

Nucleic Acids Res. 2015 Jan;43(Database issue):D690-7. doi: 10.1093/nar/gku1099. Epub 2014 Nov 14.

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