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Items: 1 to 20 of 99

1.

Design and assessment of a real time reverse transcription-PCR method to genotype single-stranded RNA male-specific coliphages (Family Leviviridae).

Friedman SD, Cooper EM, Calci KR, Genthner FJ.

J Virol Methods. 2011 May;173(2):196-202. doi: 10.1016/j.jviromet.2011.02.005. Epub 2011 Feb 12.

PMID:
21320531
2.

Male-specific RNA coliphages detected by plaque assay and RT-PCR in tropical river waters and animal fecal matter.

Yee SY, Fong NY, Fong GT, Tak OJ, Hui GT, Su Ming Y.

Int J Environ Health Res. 2006 Feb;16(1):59-68.

PMID:
16507481
3.

A reverse transcription-PCR assay to distinguish the four genogroups of male-specific (F+) RNA coliphages.

Friedman SD, Cooper EM, Casanova L, Sobsey MD, Genthner FJ.

J Virol Methods. 2009 Jul;159(1):47-52. doi: 10.1016/j.jviromet.2009.02.028. Epub 2009 Mar 9.

PMID:
19442844
4.

Development and evaluation of a culture-independent method for source determination of fecal wastes in surface and storm waters using reverse transcriptase-PCR detection of FRNA coliphage genogroup gene sequences.

Paar J 3rd, Doolittle MM, Varma M, Siefring S, Oshima K, Haugland RA.

J Microbiol Methods. 2015 May;112:28-35. doi: 10.1016/j.mimet.2015.02.015. Epub 2015 Mar 3.

PMID:
25744574
5.

Molecular detection and genotyping of male-specific coliphages by reverse transcription-PCR and reverse line blot hybridization.

Vinjé J, Oudejans SJ, Stewart JR, Sobsey MD, Long SC.

Appl Environ Microbiol. 2004 Oct;70(10):5996-6004.

6.

Sequence variation among group III F-specific RNA coliphages from water samples and swine lagoons.

Stewart JR, Vinjé J, Oudejans SJ, Scott GI, Sobsey MD.

Appl Environ Microbiol. 2006 Feb;72(2):1226-30.

7.

Genotyping male-specific RNA coliphages by hybridization with oligonucleotide probes.

Hsu FC, Shieh YS, van Duin J, Beekwilder MJ, Sobsey MD.

Appl Environ Microbiol. 1995 Nov;61(11):3960-6.

8.

Use of reverse transcription-real time polymerase chain reaction (real time RT-PCR) assays with Universal Probe Library (UPL) probes for the detection and genotyping of infectious pancreatic necrosis virus strains isolated in Chile.

Calleja F, Godoy MG, Cárcamo JG, Bandín I, Yáñez AJ, Dopazo CP, Kibenge FS, Avendaño-Herrera R.

J Virol Methods. 2012 Jul;183(1):80-5. doi: 10.1016/j.jviromet.2012.03.022. Epub 2012 Mar 30.

PMID:
22484616
9.
10.

Development of real-time RT-PCR methods for specific detection of F-specific RNA bacteriophage genogroups: application to urban raw wastewater.

Ogorzaly L, Gantzer C.

J Virol Methods. 2006 Dec;138(1-2):131-9. Epub 2006 Sep 25. Erratum in: J Virol Methods. 2007 Jul;143(1):122.

PMID:
16997389
11.

Molecular characterization of bacteriophages for microbial source tracking in Korea.

Lee JE, Lim MY, Kim SY, Lee S, Lee H, Oh HM, Hur HG, Ko G.

Appl Environ Microbiol. 2009 Nov;75(22):7107-14. doi: 10.1128/AEM.00464-09. Epub 2009 Sep 18.

12.

Specific real-time reverse transcription-polymerase chain reaction for detection and quantitation of turkey coronavirus RNA in tissues and feces from turkeys infected with turkey coronavirus.

Chen YN, Wu CC, Bryan T, Hooper T, Schrader D, Lin TL.

J Virol Methods. 2010 Feb;163(2):452-8. doi: 10.1016/j.jviromet.2009.11.012. Epub 2009 Nov 14.

PMID:
19917315
13.

Application of F⁺RNA Coliphages as Source Tracking Enteric Viruses on Parsley and Leek Using RT-PCR.

Shahrampour D, Yavarmanesh M, Najafi MB, Mohebbi M.

Food Environ Virol. 2015 Dec;7(4):381-9. doi: 10.1007/s12560-015-9212-6. Epub 2015 Aug 13.

PMID:
26264153
14.

Evaluation of Bacteroides fragilis GB-124 bacteriophages as novel human-associated faecal indicators in the United States.

McMinn BR, Korajkic A, Ashbolt NJ.

Lett Appl Microbiol. 2014 Jul;59(1):115-21. doi: 10.1111/lam.12252. Epub 2014 Apr 12.

15.

Usefulness of monitoring tropical streams for male-specific RNA coliphages.

Luther K, Fujioka R.

J Water Health. 2004 Sep;2(3):171-81.

PMID:
15497813
16.

Application of real-time PCR assays to genotyping of F-specific phages in river water and sediments in Japan.

Haramoto E, Kitajima M, Katayama H, Asami M, Akiba M, Kunikane S.

Water Res. 2009 Aug;43(15):3759-64. doi: 10.1016/j.watres.2009.05.043. Epub 2009 Jun 6.

PMID:
19555992
17.

Detection of Tomato black ring virus by real-time one-step RT-PCR.

Harper SJ, Delmiglio C, Ward LI, Clover GR.

J Virol Methods. 2011 Jan;171(1):190-4. doi: 10.1016/j.jviromet.2010.10.023. Epub 2010 Oct 27.

PMID:
21034774
18.

Genogroup distribution of F-specific coliphages in wastewater and river water in the Kofu basin in Japan.

Haramoto E, Otagiri M, Morita H, Kitajima M.

Lett Appl Microbiol. 2012 Apr;54(4):367-73. doi: 10.1111/j.1472-765X.2012.03221.x. Epub 2012 Mar 6.

19.

Detection and characterization of F+ RNA bacteriophages in water and shellfish: application of a multiplex real-time reverse transcription PCR.

Wolf S, Hewitt J, Rivera-Aban M, Greening GE.

J Virol Methods. 2008 Apr;149(1):123-8. doi: 10.1016/j.jviromet.2007.12.012. Epub 2008 Feb 15.

PMID:
18280588
20.

Improved detection and quantitation of norovirus from water.

Gregory JB, Webster LF, Griffith JF, Stewart JR.

J Virol Methods. 2011 Mar;172(1-2):38-45. doi: 10.1016/j.jviromet.2010.12.011. Epub 2010 Dec 24.

PMID:
21185870

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