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Global trends in molecular epidemiology of HIV-1 during 2000-2007.

Hemelaar J, Gouws E, Ghys PD, Osmanov S; WHO-UNAIDS Network for HIV Isolation and Characterisation.

AIDS. 2011 Mar 13;25(5):679-89. doi: 10.1097/QAD.0b013e328342ff93.


Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004.

Hemelaar J, Gouws E, Ghys PD, Osmanov S.

AIDS. 2006 Oct 24;20(16):W13-23.


Nationwide Trends in Molecular Epidemiology of HIV-1 in China.

Li X, Li W, Zhong P, Fang K, Zhu K, Musa TH, Song Y, Du G, Gao R, Guo Y, Yan W, Xuan Y, Wei P.

AIDS Res Hum Retroviruses. 2016 Sep;32(9):851-9. doi: 10.1089/AID.2016.0029. Epub 2016 Jun 16.


Extensive and complex HIV-1 recombination between B', C and CRF01_AE among IDUs in south-east Asia.

Pang W, Zhang C, Duo L, Zhou YH, Yao ZH, Liu FL, Li H, Tu YQ, Zheng YT.

AIDS. 2012 Jun 1;26(9):1121-9. doi: 10.1097/QAD.0b013e3283522c97.


Genetic analysis of HIV-1 strains in rural eastern Cameroon indicates the evolution of second-generation recombinants to circulating recombinant forms.

Konings FA, Haman GR, Xue Y, Urbanski MM, Hertzmark K, Nanfack A, Achkar JM, Burda ST, Nyambi PN.

J Acquir Immune Defic Syndr. 2006 Jul;42(3):331-41.


Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000.

Osmanov S, Pattou C, Walker N, Schwardländer B, Esparza J; WHO-UNAIDS Network for HIV Isolation and Characterization.

J Acquir Immune Defic Syndr. 2002 Feb 1;29(2):184-90.


[HIV-1 subtype distribution determined by phylogenetic analysis of pol gene sequences and automated subtyping tools among HIV-1 isolates from the Aegian Region of Turkey].

Uluer Biçeroğlu S, Altuğlu I, Nazli Zeka A, Gökengin D, Yazan Sertöz R.

Mikrobiyol Bul. 2014 Jul;48(3):420-8. Turkish.


Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools.

Pineda-Peña AC, Faria NR, Imbrechts S, Libin P, Abecasis AB, Deforche K, Gómez-López A, Camacho RJ, de Oliveira T, Vandamme AM.

Infect Genet Evol. 2013 Oct;19:337-48. doi: 10.1016/j.meegid.2013.04.032. Epub 2013 May 7.


HIV-1 prevalence and subtype/recombinant distribution among travelers entering China from Vietnam at the HeKou port in the Yunnan province, China, between 2003 and 2012.

Wang Y, Liang Y, Feng Y, Wang B, Li Y, Wu Z, Zhang J, Baloch Z, Zhang AM, Liu L, Qin W, Xia X.

J Med Virol. 2015 Sep;87(9):1500-9. doi: 10.1002/jmv.24202. Epub 2015 Apr 10.


Current molecular epidemiology and recombination of HIV type 1 subtypes in northern Thailand.

Praparattanapan J, Tragoolpua Y, Pathom-aree W, Kotarathitithum W, Chaiwarith R, Nuntachit N, Sirisanthana T, Supparatpinyo K.

AIDS Res Hum Retroviruses. 2011 Nov;27(11):1201-6. doi: 10.1089/AID.2010.0257. Epub 2011 May 6.


Extensive Genetic Diversity of HIV-1 in Incident and Prevalent Infections among Malaysian Blood Donors: Multiple Introductions of HIV-1 Genotypes from Highly Prevalent Countries.

Chow WZ, Bon AH, Keating S, Anderios F, Halim HA, Takebe Y, Kamarulzaman A, Busch MP, Tee KK.

PLoS One. 2016 Aug 30;11(8):e0161853. doi: 10.1371/journal.pone.0161853. eCollection 2016.


Significant contribution of subtype G to HIV-1 genetic complexity in Nigeria identified by a newly developed subtyping assay specific for subtype G and CRF02_AG.

Heipertz RA Jr, Ayemoba O, Sanders-Buell E, Poltavee K, Pham P, Kijak GH, Lei E, Bose M, Howell S, OʼSullivan AM, Bates A, Cervenka T, Kuroiwa J, Akintunde A, Ibezim O, Alabi A, Okoye O, Manak M, Malia J, Peel S, Maisaka M, Singer D, O'Connell RJ, Robb ML, Kim JH, Michael NL, Njoku O, Tovanabutra S.

Medicine (Baltimore). 2016 Aug;95(32):e4346. doi: 10.1097/MD.0000000000004346.


[Genetic diversity of HIV infection worldwide and its consequences].

Peeters M, Delaporte E.

Med Trop (Mars). 1999;59(4 Pt 2):449-55. Review. French.


Identification and characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx recombinant subtypes in Mali, West Africa.

Imamichi H, Koita O, Dabitao D, Dao S, Ibrah M, Sogoba D, Dewar RL, Berg SC, Jiang MK, Parta M, Washington JA, Polis MA, Lane HC, Tounkara A.

AIDS Res Hum Retroviruses. 2009 Jan;25(1):45-55. doi: 10.1089/aid.2008.0111.


Temporal trends in the Swedish HIV-1 epidemic: increase in non-B subtypes and recombinant forms over three decades.

Neogi U, Häggblom A, Santacatterina M, Bratt G, Gisslén M, Albert J, Sonnerborg A.

PLoS One. 2014 Jun 12;9(6):e99390. doi: 10.1371/journal.pone.0099390. eCollection 2014.


A newly emerging HIV-1 recombinant lineage (CRF58_01B) disseminating among people who inject drugs in Malaysia.

Chow WZ, Takebe Y, Syafina NE, Prakasa MS, Chan KG, Al-Darraji HA, Koh C, Kamarulzaman A, Tee KK.

PLoS One. 2014 Jan 22;9(1):e85250. doi: 10.1371/journal.pone.0085250. eCollection 2014.


CRF22_01A1 is involved in the emergence of new HIV-1 recombinants in Cameroon.

Zhao J, Tang S, Ragupathy V, Gaddam D, Wang X, Zhang P, Nyambi PN, Hewlett I.

J Acquir Immune Defic Syndr. 2012 Aug 1;60(4):344-50. doi: 10.1097/QAI.0b013e318258c7e3.


Travel and the spread of HIV-1 genetic variants.

Perrin L, Kaiser L, Yerly S.

Lancet Infect Dis. 2003 Jan;3(1):22-7. Review.


Identification of new, emerging HIV-1 unique recombinant forms and drug resistant viruses circulating in Cameroon.

Ragupathy V, Zhao J, Wood O, Tang S, Lee S, Nyambi P, Hewlett I.

Virol J. 2011 Apr 23;8:185. doi: 10.1186/1743-422X-8-185.


[Distribution of HIV-1 subtypes among different populations in Dehong prefecture, Yunnan province, in 2011].

Chen M, Yao ST, Ma YL, He X, Wang JB, Cheng CL, Yang J, Su YZ, Li YL, Duan S, Chen HC, Fu LR, Jia MH, Lu L.

Zhonghua Liu Xing Bing Xue Za Zhi. 2012 Sep;33(9):883-7. Chinese.


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