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Items: 1 to 20 of 76

1.

Positive supercoiling in thermophiles and mesophiles: of the good and evil.

Valenti A, Perugino G, Rossi M, Ciaramella M.

Biochem Soc Trans. 2011 Jan;39(1):58-63. doi: 10.1042/BST0390058. Review.

PMID:
21265747
2.

Negative constrained DNA supercoiling in archaeal nucleosomes.

Musgrave D, Forterre P, Slesarev A.

Mol Microbiol. 2000 Jan;35(2):341-9.

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DNA topology and the thermal stress response, a tale from mesophiles and hyperthermophiles.

López-García P, Forterre P.

Bioessays. 2000 Aug;22(8):738-46. Review.

PMID:
10918304
5.

Sequence periodicity in complete genomes of archaea suggests positive supercoiling.

Herzel H, Weiss O, Trifonov EN.

J Biomol Struct Dyn. 1998 Oct;16(2):341-5.

PMID:
9833672
6.

Chromatin structure and dynamics in hot environments: architectural proteins and DNA topoisomerases of thermophilic archaea.

Visone V, Vettone A, Serpe M, Valenti A, Perugino G, Rossi M, Ciaramella M.

Int J Mol Sci. 2014 Sep 25;15(9):17162-87. doi: 10.3390/ijms150917162. Review.

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11.

DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus.

Napoli A, Zivanovic Y, Bocs C, Buhler C, Rossi M, Forterre P, Ciaramella M.

Nucleic Acids Res. 2002 Jun 15;30(12):2656-62.

12.

Reverse gyrase: an unusual DNA manipulator of hyperthermophilic organisms.

D'Amaro A, Rossi M, Ciaramella M.

Ital J Biochem. 2007 Jun;56(2):103-9. Review.

PMID:
17722650
13.

Analysis of tRNA composition and folding in psychrophilic, mesophilic and thermophilic genomes: indications for thermal adaptation.

Dutta A, Chaudhuri K.

FEMS Microbiol Lett. 2010 Apr;305(2):100-8. doi: 10.1111/j.1574-6968.2010.01922.x. Epub 2010 Feb 5.

14.

10-11 bp periodicities in complete genomes reflect protein structure and DNA folding.

Herzel H, Weiss O, Trifonov EN.

Bioinformatics. 1999 Mar;15(3):187-93.

PMID:
10222405
16.

Force-dependent melting of supercoiled DNA at thermophilic temperatures.

Galburt EA, Tomko EJ, Stump WT, Ruiz Manzano A.

Biophys Chem. 2014 Mar-Apr;187-188:23-8. doi: 10.1016/j.bpc.2014.01.001. Epub 2014 Jan 17.

PMID:
24486433
17.

Archaeal histone tetramerization determines DNA affinity and the direction of DNA supercoiling.

Marc F, Sandman K, Lurz R, Reeve JN.

J Biol Chem. 2002 Aug 23;277(34):30879-86. Epub 2002 Jun 10.

18.

Unexpected twist: harnessing the energy in positive supercoils to control telomere resolution.

Bankhead T, Kobryn K, Chaconas G.

Mol Microbiol. 2006 Nov;62(3):895-905. Epub 2006 Sep 25.

19.

Adenosine 5'-O-(3-thio)triphosphate (ATPgammaS) promotes positive supercoiling of DNA by T. maritima reverse gyrase.

Jungblut SP, Klostermeier D.

J Mol Biol. 2007 Aug 3;371(1):197-209. Epub 2007 May 18.

PMID:
17560602
20.

In vitro DNA binding of the archaeal protein Sso7d induces negative supercoiling at temperatures typical for thermophilic growth.

López-García P, Knapp S, Ladenstein R, Forterre P.

Nucleic Acids Res. 1998 May 15;26(10):2322-8.

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