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Items: 1 to 20 of 97


SIDEKICK: Genomic data driven analysis and decision-making framework.

Doderer MS, Yoon K, Robbins KA.

BMC Bioinformatics. 2010 Dec 30;11:611. doi: 10.1186/1471-2105-11-611.


GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.

Eden E, Navon R, Steinfeld I, Lipson D, Yakhini Z.

BMC Bioinformatics. 2009 Feb 3;10:48. doi: 10.1186/1471-2105-10-48.


AbMiner: a bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic, and immunologic studies.

Major SM, Nishizuka S, Morita D, Rowland R, Sunshine M, Shankavaram U, Washburn F, Asin D, Kouros-Mehr H, Kane D, Weinstein JN.

BMC Bioinformatics. 2006 Apr 6;7:192.


CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.

Chen X, Laudeman TW, Rushton PJ, Spraggins TA, Timko MP.

BMC Bioinformatics. 2007 Apr 19;8:129.


A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila.

Pacifico S, Liu G, Guest S, Parrish JR, Fotouhi F, Finley RL Jr.

BMC Bioinformatics. 2006 Apr 7;7:195.


GenExp: an interactive web-based genomic DAS client with client-side data rendering.

Gel Moreno B, Messeguer Peypoch X.

PLoS One. 2011;6(7):e21270. doi: 10.1371/journal.pone.0021270. Epub 2011 Jul 5.


Methods for visual mining of genomic and proteomic data atlases.

Boyle J, Kreisberg R, Bressler R, Killcoyne S.

BMC Bioinformatics. 2012 Apr 23;13:58. doi: 10.1186/1471-2105-13-58.


Scenario driven data modelling: a method for integrating diverse sources of data and data streams.

Griffith SD, Quest DJ, Brettin TS, Cottingham RW.

BMC Bioinformatics. 2011 Oct 18;12 Suppl 10:S17. doi: 10.1186/1471-2105-12-S10-S17.


GARNET--gene set analysis with exploration of annotation relations.

Rho K, Kim B, Jang Y, Lee S, Bae T, Seo J, Seo C, Lee J, Kang H, Yu U, Kim S, Lee S, Kim WK.

BMC Bioinformatics. 2011 Feb 15;12 Suppl 1:S25. doi: 10.1186/1471-2105-12-S1-S25.


An architecture for biological information extraction and representation.

Vailaya A, Bluvas P, Kincaid R, Kuchinsky A, Creech M, Adler A.

Bioinformatics. 2005 Feb 15;21(4):430-8. Epub 2004 Dec 17.


Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology.

Goesmann A, Linke B, Rupp O, Krause L, Bartels D, Dondrup M, McHardy AC, Wilke A, Pühler A, Meyer F.

J Biotechnol. 2003 Dec 19;106(2-3):157-67.


MyWEST: my Web Extraction Software Tool for effective mining of annotations from web-based databanks.

Masseroli M, Stella A, Meani N, Alcalay M, Pinciroli F.

Bioinformatics. 2004 Dec 12;20(18):3326-35. Epub 2004 Jul 9.


DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.

Sherman BT, Huang da W, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA.

BMC Bioinformatics. 2007 Nov 2;8:426.


geneCBR: a translational tool for multiple-microarray analysis and integrative information retrieval for aiding diagnosis in cancer research.

Glez-Peña D, Díaz F, Hernández JM, Corchado JM, Fdez-Riverola F.

BMC Bioinformatics. 2009 Jun 18;10:187. doi: 10.1186/1471-2105-10-187.


arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays.

Menten B, Pattyn F, De Preter K, Robbrecht P, Michels E, Buysse K, Mortier G, De Paepe A, van Vooren S, Vermeesch J, Moreau Y, De Moor B, Vermeulen S, Speleman F, Vandesompele J.

BMC Bioinformatics. 2005 May 23;6:124.


Genomic data visualization on the Web.

Wu W, Noble WS.

Bioinformatics. 2004 Jul 22;20(11):1804-5. Epub 2004 Feb 26.


Genephony: a knowledge management tool for genome-wide research.

Nuzzo A, Riva A.

BMC Bioinformatics. 2009 Sep 3;10:278. doi: 10.1186/1471-2105-10-278.

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