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Items: 1 to 20 of 126


Genome-wide analysis of promoter architecture in Drosophila melanogaster.

Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, Bickel PJ, Carninci P, Carlson JW, Celniker SE.

Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22.


Computational analysis of core promoters in the Drosophila genome.

Ohler U, Liao GC, Niemann H, Rubin GM.

Genome Biol. 2002;3(12):RESEARCH0087. Epub 2002 Dec 20.


Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome.

Rach EA, Yuan HY, Majoros WH, Tomancak P, Ohler U.

Genome Biol. 2009;10(7):R73. doi: 10.1186/gb-2009-10-7-r73. Epub 2009 Jul 9.


Genome-wide analysis of core promoter structures in Schizosaccharomyces pombe with DeepCAGE.

Li H, Hou J, Bai L, Hu C, Tong P, Kang Y, Zhao X, Shao Z.

RNA Biol. 2015;12(5):525-37. doi: 10.1080/15476286.2015.1022704.


TSS seq based core promoter architecture in blood feeding Tsetse fly (Glossina morsitans morsitans) vector of Trypanosomiasis.

Mwangi S, Attardo G, Suzuki Y, Aksoy S, Christoffels A.

BMC Genomics. 2015 Sep 22;16:722. doi: 10.1186/s12864-015-1921-6.


Global identification of transcription start sites in the genome of Apis mellifera using 5'LongSAGE.

Zheng H, Sun L, Peng W, Shen Y, Wang Y, Xu B, Gu W, Chen S, Huang Z, Wang S.

J Exp Zool B Mol Dev Evol. 2011 Nov 15;316(7):500-14. doi: 10.1002/jez.b.21421. Epub 2011 Jun 21.


Genome wide analysis of Arabidopsis core promoters.

Molina C, Grotewold E.

BMC Genomics. 2005 Feb 25;6:25.


Genome-wide localization of exosome components to active promoters and chromatin insulators in Drosophila.

Lim SJ, Boyle PJ, Chinen M, Dale RK, Lei EP.

Nucleic Acids Res. 2013 Mar 1;41(5):2963-80. doi: 10.1093/nar/gkt037. Epub 2013 Jan 28.


Nucleosome organization in the Drosophila genome.

Mavrich TN, Jiang C, Ioshikhes IP, Li X, Venters BJ, Zanton SJ, Tomsho LP, Qi J, Glaser RL, Schuster SC, Gilmour DS, Albert I, Pugh BF.

Nature. 2008 May 15;453(7193):358-62. doi: 10.1038/nature06929. Epub 2008 Apr 13.


Deep cap analysis gene expression (CAGE): genome-wide identification of promoters, quantification of their expression, and network inference.

de Hoon M, Hayashizaki Y.

Biotechniques. 2008 Apr;44(5):627-8, 630, 632. doi: 10.2144/000112802. Review.


Classification of Promoters Based on the Combination of Core Promoter Elements Exhibits Different Histone Modification Patterns.

Natsume-Kitatani Y, Mamitsuka H.

PLoS One. 2016 Mar 22;11(3):e0151917. doi: 10.1371/journal.pone.0151917. eCollection 2016.


[LTR retrotransposons as a source of promoters in the Drosophila genome].

Makunin IV, Iurlova AA.

Genetika. 2010 Sep;46(9):1202-4. Russian.


Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.

Čuklina J, Hahn J, Imakaev M, Omasits U, Förstner KU, Ljubimov N, Goebel M, Pessi G, Fischer HM, Ahrens CH, Gelfand MS, Evguenieva-Hackenberg E.

BMC Genomics. 2016 Apr 23;17:302. doi: 10.1186/s12864-016-2602-9.


Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters.

Ponjavic J, Lenhard B, Kai C, Kawai J, Carninci P, Hayashizaki Y, Sandelin A.

Genome Biol. 2006;7(8):R78. Epub 2006 Aug 17.


Comparative promoter region analysis powered by CORG.

Dieterich C, Grossmann S, Tanzer A, Röpcke S, Arndt PF, Stadler PF, Vingron M.

BMC Genomics. 2005 Feb 21;6:24.


Novel core promoter elements in the oomycete pathogen Phytophthora infestans and their influence on expression detected by genome-wide analysis.

Roy S, Poidevin L, Jiang T, Judelson HS.

BMC Genomics. 2013 Feb 16;14:106. doi: 10.1186/1471-2164-14-106.


The TAGteam motif facilitates binding of 21 sequence-specific transcription factors in the Drosophila embryo.

Satija R, Bradley RK.

Genome Res. 2012 Apr;22(4):656-65. doi: 10.1101/gr.130682.111. Epub 2012 Jan 13.


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