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Items: 1 to 20 of 152

1.

Bookshelf: a simple curation system for the storage of biomolecular simulation data.

Vohra S, Hall BA, Holdbrook DA, Khalid S, Biggin PC.

Database (Oxford). 2010 Dec 17;2010:baq033. doi: 10.1093/database/baq033.

2.

Alkahest NuclearBLAST : a user-friendly BLAST management and analysis system.

Diener SE, Houfek TD, Kalat SE, Windham DE, Burke M, Opperman C, Dean RA.

BMC Bioinformatics. 2005 Jun 15;6:147.

3.

iBIOMES: managing and sharing biomolecular simulation data in a distributed environment.

Thibault JC, Facelli JC, Cheatham TE 3rd.

J Chem Inf Model. 2013 Mar 25;53(3):726-36. doi: 10.1021/ci300524j.

PMID:
23413948
4.

A digital repository with an extensible data model for biobanking and genomic analysis management.

Izzo M, Mortola F, Arnulfo G, Fato MM, Varesio L.

BMC Genomics. 2014;15 Suppl 3:S3. doi: 10.1186/1471-2164-15-S3-S3.

5.

The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases.

Côté RG, Jones P, Martens L, Kerrien S, Reisinger F, Lin Q, Leinonen R, Apweiler R, Hermjakob H.

BMC Bioinformatics. 2007 Oct 18;8:401.

6.

A repository based on a dynamically extensible data model supporting multidisciplinary research in neuroscience.

Corradi L, Porro I, Schenone A, Momeni P, Ferrari R, Nobili F, Ferrara M, Arnulfo G, Fato MM.

BMC Med Inform Decis Mak. 2012 Oct 8;12:115. doi: 10.1186/1472-6947-12-115.

7.

Informatics in radiology: use of CouchDB for document-based storage of DICOM objects.

Rascovsky SJ, Delgado JA, Sanz A, Calvo VD, Castrillón G.

Radiographics. 2012 May-Jun;32(3):913-27. doi: 10.1148/rg.323115049.

PMID:
22403116
8.

EDGE(3): a web-based solution for management and analysis of Agilent two color microarray experiments.

Vollrath AL, Smith AA, Craven M, Bradfield CA.

BMC Bioinformatics. 2009 Sep 4;10:280. doi: 10.1186/1471-2105-10-280.

9.

BioDownloader: bioinformatics downloads and updates in a few clicks.

Shapovalov MV, Canutescu AA, Dunbrack RL Jr.

Bioinformatics. 2007 Jun 1;23(11):1437-9.

10.

KMD: an open-source port of the ArrayExpress microarray database.

Mainguy JP, Macdonnell G, Bund S, Wild DL.

Appl Bioinformatics. 2004;3(4):257-60.

PMID:
15702957
11.

PRODIS: a proteomics data management system with support to experiment tracking.

Faria-Campos A, Fernandes-Rausch H, Val C, Thorun P, Abreu V, Batista PH, Mendonça PH, Alves V, Rodrigues MR, Pimenta A, Franco G, Campos SV.

BMC Genomics. 2011 Dec 22;12 Suppl 4:S15. doi: 10.1186/1471-2164-12-S4-S15.

12.

METIS: multiple extraction techniques for informative sentences.

Mitchell AL, Divoli A, Kim JH, Hilario M, Selimas I, Attwood TK.

Bioinformatics. 2005 Nov 15;21(22):4196-7.

13.

A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila.

Pacifico S, Liu G, Guest S, Parrish JR, Fotouhi F, Finley RL Jr.

BMC Bioinformatics. 2006 Apr 7;7:195.

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Atlas - a data warehouse for integrative bioinformatics.

Shah SP, Huang Y, Xu T, Yuen MM, Ling J, Ouellette BF.

BMC Bioinformatics. 2005 Feb 21;6:34.

17.

Databases, data tombs and dust in the wind.

Wren JD, Bateman A.

Bioinformatics. 2008 Oct 1;24(19):2127-8. doi: 10.1093/bioinformatics/btn464.

18.

Critical evaluation of the JDO API for the persistence and portability requirements of complex biological databases.

Srdanovic M, Schenk U, Schwieger M, Campagne F.

BMC Bioinformatics. 2005 Jan 10;6:5.

19.

ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses.

Stokes TH, Torrance JT, Li H, Wang MD.

BMC Bioinformatics. 2008 May 28;9 Suppl 6:S18. doi: 10.1186/1471-2105-9-S6-S18.

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