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Items: 1 to 20 of 384

1.

A general model of codon bias due to GC mutational bias.

Palidwor GA, Perkins TJ, Xia X.

PLoS One. 2010 Oct 27;5(10):e13431. doi: 10.1371/journal.pone.0013431.

2.

Comparative genome analysis of six malarial parasites using codon usage bias based tools.

Yadav MK, Swati D.

Bioinformation. 2012;8(24):1230-9. doi: 10.6026/97320630081230. Epub 2012 Dec 8.

4.

Causes and implications of codon usage bias in RNA viruses.

Belalov IS, Lukashev AN.

PLoS One. 2013;8(2):e56642. doi: 10.1371/journal.pone.0056642. Epub 2013 Feb 25.

5.

Clonorchis sinensis: codon usage in nuclear genes.

Tang Y, Cho PY, Kim TI, Hong SJ.

Exp Parasitol. 2007 Feb;115(2):187-91. Epub 2006 Oct 5.

PMID:
17027003
7.

Patterns of codon usage bias in three dicot and four monocot plant species.

Kawabe A, Miyashita NT.

Genes Genet Syst. 2003 Oct;78(5):343-52.

8.

Mutation bias is the driving force of codon usage in the Gallus gallus genome.

Rao Y, Wu G, Wang Z, Chai X, Nie Q, Zhang X.

DNA Res. 2011 Dec;18(6):499-512. doi: 10.1093/dnares/dsr035. Epub 2011 Oct 27.

9.

Comparative analysis of the base composition and codon usages in fourteen mycobacteriophage genomes.

Sahu K, Gupta SK, Sau S, Ghosh TC.

J Biomol Struct Dyn. 2005 Aug;23(1):63-71.

PMID:
15918677
10.

The genome of Campylobacter jejuni: codon and amino acid usage.

Fuglsang A.

APMIS. 2003 Jun;111(6):605-18.

PMID:
12969016
11.

Codon usage bias in prokaryotic pyrimidine-ending codons is associated with the degeneracy of the encoded amino acids.

Wald N, Alroy M, Botzman M, Margalit H.

Nucleic Acids Res. 2012 Aug;40(15):7074-83. doi: 10.1093/nar/gks348. Epub 2012 May 11.

12.

GC-biased gene conversion and selection affect GC content in the Oryza genus (rice).

Muyle A, Serres-Giardi L, Ressayre A, Escobar J, Glémin S.

Mol Biol Evol. 2011 Sep;28(9):2695-706. doi: 10.1093/molbev/msr104. Epub 2011 Apr 18.

PMID:
21504892
13.
14.

Rapid divergence of codon usage patterns within the rice genome.

Wang HC, Hickey DA.

BMC Evol Biol. 2007 Feb 8;7 Suppl 1:S6.

15.

Synonymous codon usage in Lactococcus lactis: mutational bias versus translational selection.

Gupta SK, Bhattacharyya TK, Ghosh TC.

J Biomol Struct Dyn. 2004 Feb;21(4):527-36.

PMID:
14692797
16.

[Analysis on codon usage of chloroplast genome of Eleutherococcus senticosus].

Xing ZB, Cao L, Zhou M, Xiu LS.

Zhongguo Zhong Yao Za Zhi. 2013 Mar;38(5):661-5. Chinese.

PMID:
23724670
17.

Gender-specific selection on codon usage in plant genomes.

Whittle CA, Malik MR, Krochko JE.

BMC Genomics. 2007 Jun 13;8:169.

18.

Analysis of synonymous codon usage patterns in torque teno sus virus 1 (TTSuV1).

Zhang Z, Dai W, Wang Y, Lu C, Fan H.

Arch Virol. 2013 Jan;158(1):145-54. doi: 10.1007/s00705-012-1480-y. Epub 2012 Sep 26.

PMID:
23011310
19.

Compositional correlation and codon usage studies in Buchnera aphidicola.

Gupta SK, Bhattacharyya TK, Ghosh TC.

Indian J Biochem Biophys. 2002 Feb;39(1):35-48.

PMID:
22896887
20.

Unusual usage of AGG and TTG codons in humans and their viruses.

Kliman RM, Bernal CA.

Gene. 2005 Jun 6;352:92-9.

PMID:
15922516

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