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Items: 1 to 20 of 89

1.

Second-generation environmental sequencing unmasks marine metazoan biodiversity.

Fonseca VG, Carvalho GR, Sung W, Johnson HF, Power DM, Neill SP, Packer M, Blaxter ML, Lambshead PJ, Thomas WK, Creer S.

Nat Commun. 2010 Oct 19;1:98. doi: 10.1038/ncomms1095.

2.

Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises.

Creer S, Fonseca VG, Porazinska DL, Giblin-Davis RM, Sung W, Power DM, Packer M, Carvalho GR, Blaxter ML, Lambshead PJ, Thomas WK.

Mol Ecol. 2010 Mar;19 Suppl 1:4-20. doi: 10.1111/j.1365-294X.2009.04473.x. Review.

PMID:
20331766
3.

Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill.

Bik HM, Halanych KM, Sharma J, Thomas WK.

PLoS One. 2012;7(6):e38550. doi: 10.1371/journal.pone.0038550. Epub 2012 Jun 6.

4.

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water.

Stoeck T, Bass D, Nebel M, Christen R, Jones MD, Breiner HW, Richards TA.

Mol Ecol. 2010 Mar;19 Suppl 1:21-31. doi: 10.1111/j.1365-294X.2009.04480.x.

PMID:
20331767
5.

High-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystems.

Lejzerowicz F, Esling P, Pillet L, Wilding TA, Black KD, Pawlowski J.

Sci Rep. 2015 Sep 10;5:13932. doi: 10.1038/srep13932.

6.

Assessing macroinvertebrate biodiversity in freshwater ecosystems: advances and challenges in DNA-based approaches.

Pfrender ME, Hawkins CP, Bagley M, Courtney GW, Creutzburg BR, Epler JH, Fend S, Schindel D, Ferrington LC Jr, Hartzell PL, Jackson S, Larsen DP, Lévesque A, Morse JC, Petersen MJ, Ruiter D, Whiting M.

Q Rev Biol. 2010 Sep;85(3):319-40. Review.

PMID:
20919633
7.

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities.

Stoeck T, Behnke A, Christen R, Amaral-Zettler L, Rodriguez-Mora MJ, Chistoserdov A, Orsi W, Edgcomb VP.

BMC Biol. 2009 Nov 3;7:72. doi: 10.1186/1741-7007-7-72.

8.

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity.

Leray M, Knowlton N.

Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2076-81. doi: 10.1073/pnas.1424997112. Epub 2015 Feb 2.

9.

Metagenetic tools for the census of marine meiofaunal biodiversity: An overview.

Carugati L, Corinaldesi C, Dell'Anno A, Danovaro R.

Mar Genomics. 2015 Dec;24 Pt 1:11-20. doi: 10.1016/j.margen.2015.04.010. Epub 2015 May 7. Review.

10.

Pyrosequencing for assessing diversity of eukaryotic microbes: analysis of data on marine planktonic ciliates and comparison with traditional methods.

Santoferrara LF, Grattepanche JD, Katz LA, McManus GB.

Environ Microbiol. 2014 Sep;16(9):2752-63. doi: 10.1111/1462-2920.12380. Epub 2014 Feb 18.

PMID:
24444191
11.

[Hyperbolic growth of marine and continental biodiversity through the phanerozoic and community evolution].

Markov AV, Korotaev AV.

Zh Obshch Biol. 2008 May-Jun;69(3):175-94. Russian.

PMID:
18677962
12.

Patterns and Variation in Benthic Biodiversity in a Large Marine Ecosystem.

Piacenza SE, Barner AK, Benkwitt CE, Boersma KS, Cerny-Chipman EB, Ingeman KE, Kindinger TL, Lee JD, Lindsley AJ, Reimer JN, Rowe JC, Shen C, Thompson KA, Thurman LL, Heppell SS.

PLoS One. 2015 Aug 26;10(8):e0135135. doi: 10.1371/journal.pone.0135135. eCollection 2015.

13.

Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities.

Hollatz C, Leite BR, Lobo J, Froufe H, Egas C, Costa FO.

Genome. 2017 Mar;60(3):260-271. doi: 10.1139/gen-2015-0220. Epub 2016 Oct 25.

PMID:
28145743
14.

The relation between productivity and species diversity in temperate-Arctic marine ecosystems.

Witman JD, Cusson M, Archambault P, Pershing AJ, Mieszkowska N.

Ecology. 2008 Nov;89(11 Suppl):S66-80.

PMID:
19097485
15.

New insights into the diversity of marine picoeukaryotes.

Not F, del Campo J, Balagué V, de Vargas C, Massana R.

PLoS One. 2009 Sep 29;4(9):e7143. doi: 10.1371/journal.pone.0007143.

16.

Unveiling the Biodiversity of Deep-Sea Nematodes through Metabarcoding: Are We Ready to Bypass the Classical Taxonomy?

Dell'Anno A, Carugati L, Corinaldesi C, Riccioni G, Danovaro R.

PLoS One. 2015 Dec 23;10(12):e0144928. doi: 10.1371/journal.pone.0144928. eCollection 2015.

17.

Improved inference of taxonomic richness from environmental DNA.

Morgan MJ, Chariton AA, Hartley DM, Court LN, Hardy CM.

PLoS One. 2013 Aug 26;8(8):e71974. doi: 10.1371/journal.pone.0071974. eCollection 2013.

18.

Macroalgal blooms alter community structure and primary productivity in marine ecosystems.

Lyons DA, Arvanitidis C, Blight AJ, Chatzinikolaou E, Guy-Haim T, Kotta J, Orav-Kotta H, Queirós AM, Rilov G, Somerfield PJ, Crowe TP.

Glob Chang Biol. 2014 Sep;20(9):2712-24. doi: 10.1111/gcb.12644. Epub 2014 Jul 4. Review.

PMID:
24890042
19.

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity.

Buée M, Reich M, Murat C, Morin E, Nilsson RH, Uroz S, Martin F.

New Phytol. 2009 Oct;184(2):449-56. doi: 10.1111/j.1469-8137.2009.03003.x. Epub 2009 Aug 22.

20.

High-Throughput Sequencing-The Key to Rapid Biodiversity Assessment of Marine Metazoa?

Mohrbeck I, Raupach MJ, Martínez Arbizu P, Knebelsberger T, Laakmann S.

PLoS One. 2015 Oct 19;10(10):e0140342. doi: 10.1371/journal.pone.0140342. eCollection 2015.

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