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Items: 1 to 20 of 118

1.

Computational studies of protegrin antimicrobial peptides: a review.

Bolintineanu DS, Kaznessis YN.

Peptides. 2011 Jan;32(1):188-201. doi: 10.1016/j.peptides.2010.10.006. Epub 2010 Oct 12. Review.

2.

Antimicrobial mechanism of pore-forming protegrin peptides: 100 pores to kill E. coli.

Bolintineanu D, Hazrati E, Davis HT, Lehrer RI, Kaznessis YN.

Peptides. 2010 Jan;31(1):1-8. doi: 10.1016/j.peptides.2009.11.010. Epub 2009 Nov 30.

3.

Multiscale models of the antimicrobial peptide protegrin-1 on gram-negative bacteria membranes.

Bolintineanu DS, Vivcharuk V, Kaznessis YN.

Int J Mol Sci. 2012;13(9):11000-11. doi: 10.3390/ijms130911000. Epub 2012 Sep 5. Review.

4.

Membrane interactions and pore formation by the antimicrobial peptide protegrin.

Lazaridis T, He Y, Prieto L.

Biophys J. 2013 Feb 5;104(3):633-42. doi: 10.1016/j.bpj.2012.12.038.

5.

Dimerization of protegrin-1 in different environments.

Vivcharuk V, Kaznessis YN.

Int J Mol Sci. 2010 Sep 9;11(9):3177-94. doi: 10.3390/ijms11093177.

6.

The effect of membrane curvature on the conformation of antimicrobial peptides: implications for binding and the mechanism of action.

Chen R, Mark AE.

Eur Biophys J. 2011 Apr;40(4):545-53. doi: 10.1007/s00249-011-0677-4. Epub 2011 Jan 26.

7.

Crystallization of antimicrobial pores in membranes: magainin and protegrin.

Yang L, Weiss TM, Lehrer RI, Huang HW.

Biophys J. 2000 Oct;79(4):2002-9. Erratum in: Biophys J 2001 Feb;80(2):1029.

8.

Antimicrobial peptides: linking partition, activity and high membrane-bound concentrations.

Melo MN, Ferre R, Castanho MA.

Nat Rev Microbiol. 2009 Mar;7(3):245-50. doi: 10.1038/nrmicro2095. Review.

PMID:
19219054
9.

Antimicrobial peptide protegrin-3 adopt an antiparallel dimer in the presence of DPC micelles: a high-resolution NMR study.

Usachev KS, Efimov SV, Kolosova OA, Klochkova EA, Aganov AV, Klochkov VV.

J Biomol NMR. 2015 May;62(1):71-9. doi: 10.1007/s10858-015-9920-0. Epub 2015 Mar 19.

PMID:
25786621
10.

Coupling molecular dynamics simulations with experiments for the rational design of indolicidin-analogous antimicrobial peptides.

Tsai CW, Hsu NY, Wang CH, Lu CY, Chang Y, Tsai HH, Ruaan RC.

J Mol Biol. 2009 Sep 25;392(3):837-54. doi: 10.1016/j.jmb.2009.06.071. Epub 2009 Jul 2.

PMID:
19576903
11.

Structure of the antimicrobial beta-hairpin peptide protegrin-1 in a DLPC lipid bilayer investigated by molecular dynamics simulation.

Khandelia H, Kaznessis YN.

Biochim Biophys Acta. 2007 Mar;1768(3):509-20. Epub 2006 Dec 15. Erratum in: Biochim Biophys Acta. 2010 Aug;1798(8):1623.

12.

Computer simulation of antimicrobial peptides.

Mátyus E, Kandt C, Tieleman DP.

Curr Med Chem. 2007;14(26):2789-98. Review.

PMID:
18045125
13.

Antimicrobial protegrin-1 forms ion channels: molecular dynamic simulation, atomic force microscopy, and electrical conductance studies.

Capone R, Mustata M, Jang H, Arce FT, Nussinov R, Lal R.

Biophys J. 2010 Jun 2;98(11):2644-52. doi: 10.1016/j.bpj.2010.02.024.

14.
15.

The importance of membrane defects-lessons from simulations.

Bennett WF, Tieleman DP.

Acc Chem Res. 2014 Aug 19;47(8):2244-51. doi: 10.1021/ar4002729. Epub 2014 Jun 3.

PMID:
24892900
16.

Mechanisms of peptide-induced pore formation in lipid bilayers investigated by oriented 31P solid-state NMR spectroscopy.

Bertelsen K, Dorosz J, Hansen SK, Nielsen NC, Vosegaard T.

PLoS One. 2012;7(10):e47745. doi: 10.1371/journal.pone.0047745. Epub 2012 Oct 18.

17.

Alpha-helical cationic antimicrobial peptides: relationships of structure and function.

Huang Y, Huang J, Chen Y.

Protein Cell. 2010 Feb;1(2):143-52. doi: 10.1007/s13238-010-0004-3. Epub 2010 Feb 6. Review.

18.

Probing the disparate effects of arginine and lysine residues on antimicrobial peptide/bilayer association.

Rice A, Wereszczynski J.

Biochim Biophys Acta. 2017 Oct;1859(10):1941-1950. doi: 10.1016/j.bbamem.2017.06.002. Epub 2017 Jun 3.

PMID:
28583830
19.
20.

Using fluorous amino acids to probe the effects of changing hydrophobicity on the physical and biological properties of the beta-hairpin antimicrobial peptide protegrin-1.

Gottler LM, de la Salud Bea R, Shelburne CE, Ramamoorthy A, Marsh EN.

Biochemistry. 2008 Sep 2;47(35):9243-50. doi: 10.1021/bi801045n. Epub 2008 Aug 12.

PMID:
18693751

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