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Items: 1 to 20 of 95

1.

Complex prokaryotic genome structure: rapid evolution of chromosome II.

Bavishi A, Abhishek A, Lin L, Choudhary M.

Genome. 2010 Sep;53(9):675-87. doi: 10.1139/g10-046.

PMID:
20924417
2.

Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II.

Choudhary M, Zanhua X, Fu YX, Kaplan S.

J Bacteriol. 2007 Mar;189(5):1914-21. Epub 2006 Dec 15.

3.

Low-resolution sequencing of Rhodobacter sphaeroides 2.4.1T: chromosome II is a true chromosome.

Choudhary M, Mackenzie C, Nereng K, Sodergren E, Weinstock GM, Kaplan S.

Microbiology. 1997 Oct;143 ( Pt 10):3085-99.

PMID:
9353914
4.

Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum-Brucella group by recA and 16S rRNA gene-based comparative sequence analysis.

Scholz HC, Al Dahouk S, Tomaso H, Neubauer H, Witte A, Schloter M, Kämpfer P, Falsen E, Pfeffer M, Engel M.

Syst Appl Microbiol. 2008 Mar;31(1):1-16. doi: 10.1016/j.syapm.2007.10.004. Epub 2008 Jan 28.

PMID:
18222618
5.

Prokaryotic genes in eukaryotic genome sequences: when to infer horizontal gene transfer and when to suspect an actual microbe.

Artamonova II, Lappi T, Zudina L, Mushegian AR.

Environ Microbiol. 2015 Jul;17(7):2203-8. doi: 10.1111/1462-2920.12854. Epub 2015 Apr 28.

PMID:
25919787
6.

Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.

Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW.

J Bacteriol. 2009 Apr;191(8):2501-11. doi: 10.1128/JB.01779-08. Epub 2009 Feb 27.

7.

An acquisition account of genomic islands based on genome signature comparisons.

van Passel MW, Bart A, Thygesen HH, Luyf AC, van Kampen AH, van der Ende A.

BMC Genomics. 2005 Nov 18;6:163.

8.

Origin of the bacterial SET domain genes: vertical or horizontal?

Alvarez-Venegas R, Sadder M, Tikhonov A, Avramova Z.

Mol Biol Evol. 2007 Feb;24(2):482-97. Epub 2006 Dec 5.

PMID:
17148507
9.

Time for a fresh look at the bacterial chromosome.

Kolstø AB.

Trends Microbiol. 1999 Jun;7(6):223-6. No abstract available.

PMID:
10366858
10.

Origin and Evolution of Rickettsial Plasmids.

El Karkouri K, Pontarotti P, Raoult D, Fournier PE.

PLoS One. 2016 Feb 11;11(2):e0147492. doi: 10.1371/journal.pone.0147492. eCollection 2016.

11.
12.

Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ.

Omelchenko MV, Makarova KS, Wolf YI, Rogozin IB, Koonin EV.

Genome Biol. 2003;4(9):R55. Epub 2003 Aug 29.

13.
14.

Brucella microti: the genome sequence of an emerging pathogen.

Audic S, Lescot M, Claverie JM, Scholz HC.

BMC Genomics. 2009 Aug 4;10:352. doi: 10.1186/1471-2164-10-352.

15.

Unconventional genomic organization in the alpha subgroup of the Proteobacteria.

Jumas-Bilak E, Michaux-Charachon S, Bourg G, Ramuz M, Allardet-Servent A.

J Bacteriol. 1998 May;180(10):2749-55.

16.

Mauve: multiple alignment of conserved genomic sequence with rearrangements.

Darling AC, Mau B, Blattner FR, Perna NT.

Genome Res. 2004 Jul;14(7):1394-403.

17.
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19.

Amelioration of bacterial genomes: rates of change and exchange.

Lawrence JG, Ochman H.

J Mol Evol. 1997 Apr;44(4):383-97.

PMID:
9089078
20.

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