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Items: 1 to 20 of 97

1.

Rapid identification of genetic modifications in Bacillus anthracis using whole genome draft sequences generated by 454 pyrosequencing.

Chen PE, Willner KM, Butani A, Dorsey S, George M, Stewart A, Lentz SM, Cook CE, Akmal A, Price LB, Keim PS, Mateczun A, Brahmbhatt TN, Bishop-Lilly KA, Zwick ME, Read TD, Sozhamannan S.

PLoS One. 2010 Aug 25;5(8):e12397. doi: 10.1371/journal.pone.0012397.

2.

Identification of ciprofloxacin resistance by SimpleProbe, High Resolution Melt and Pyrosequencing nucleic acid analysis in biothreat agents: Bacillus anthracis, Yersinia pestis and Francisella tularensis.

Loveless BM, Yermakova A, Christensen DR, Kondig JP, Heine HS 3rd, Wasieloski LP, Kulesh DA.

Mol Cell Probes. 2010 Jun;24(3):154-60. doi: 10.1016/j.mcp.2010.01.003. Epub 2010 Jan 25.

PMID:
20100564
3.

Whole genome sequencing of phage resistant Bacillus anthracis mutants reveals an essential role for cell surface anchoring protein CsaB in phage AP50c adsorption.

Bishop-Lilly KA, Plaut RD, Chen PE, Akmal A, Willner KM, Butani A, Dorsey S, Mokashi V, Mateczun AJ, Chapman C, George M, Luu T, Read TD, Calendar R, Stibitz S, Sozhamannan S.

Virol J. 2012 Oct 26;9:246. doi: 10.1186/1743-422X-9-246.

4.

Genomewide screening for novel genetic variations associated with ciprofloxacin resistance in Bacillus anthracis.

Serizawa M, Sekizuka T, Okutani A, Banno S, Sata T, Inoue S, Kuroda M.

Antimicrob Agents Chemother. 2010 Jul;54(7):2787-92. doi: 10.1128/AAC.01405-09. Epub 2010 Apr 12.

5.

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis.

Read TD, Salzberg SL, Pop M, Shumway M, Umayam L, Jiang L, Holtzapple E, Busch JD, Smith KL, Schupp JM, Solomon D, Keim P, Fraser CM.

Science. 2002 Jun 14;296(5575):2028-33. Epub 2002 May 9.

6.

Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years.

Keim P, Grunow R, Vipond R, Grass G, Hoffmaster A, Birdsell DN, Klee SR, Pullan S, Antwerpen M, Bayer BN, Latham J, Wiggins K, Hepp C, Pearson T, Brooks T, Sahl J, Wagner DM.

EBioMedicine. 2015 Oct 6;2(11):1613-8. doi: 10.1016/j.ebiom.2015.10.004. eCollection 2015 Nov.

7.

Virulence signatures: microarray-based approaches to discovery and analysis.

Pannucci J, Cai H, Pardington PE, Williams E, Okinaka RT, Kuske CR, Cary RB.

Biosens Bioelectron. 2004 Nov 1;20(4):706-18.

PMID:
15522585
8.

A bacteriolytic agent that detects and kills Bacillus anthracis.

Schuch R, Nelson D, Fischetti VA.

Nature. 2002 Aug 22;418(6900):884-9.

PMID:
12192412
9.
10.

Identification of a Bacillus anthracis specific indel in the yeaC gene and development of a rapid pyrosequencing assay for distinguishing B. anthracis from the B. cereus group.

Ahmod NZ, Gupta RS, Shah HN.

J Microbiol Methods. 2011 Dec;87(3):278-85. doi: 10.1016/j.mimet.2011.08.015. Epub 2011 Sep 2.

PMID:
21907250
11.

High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak.

Gilmour MW, Graham M, Van Domselaar G, Tyler S, Kent H, Trout-Yakel KM, Larios O, Allen V, Lee B, Nadon C.

BMC Genomics. 2010 Feb 18;11:120. doi: 10.1186/1471-2164-11-120.

12.

Genome-wide single nucleotide polymorphism typing method for identification of Bacillus anthracis species and strains among B. cereus group species.

Kuroda M, Serizawa M, Okutani A, Sekizuka T, Banno S, Inoue S.

J Clin Microbiol. 2010 Aug;48(8):2821-9. doi: 10.1128/JCM.00137-10. Epub 2010 Jun 16.

13.
14.

Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain.

Van Ert MN, Easterday WR, Simonson TS, U'Ren JM, Pearson T, Kenefic LJ, Busch JD, Huynh LY, Dukerich M, Trim CB, Beaudry J, Welty-Bernard A, Read T, Fraser CM, Ravel J, Keim P.

J Clin Microbiol. 2007 Jan;45(1):47-53. Epub 2006 Nov 8.

15.

Comparison of three next-generation sequencing platforms for metagenomic sequencing and identification of pathogens in blood.

Frey KG, Herrera-Galeano JE, Redden CL, Luu TV, Servetas SL, Mateczun AJ, Mokashi VP, Bishop-Lilly KA.

BMC Genomics. 2014 Feb 4;15:96. doi: 10.1186/1471-2164-15-96.

16.

Overview of molecular typing methods for outbreak detection and epidemiological surveillance.

Sabat AJ, Budimir A, Nashev D, Sá-Leão R, van Dijl Jm, Laurent F, Grundmann H, Friedrich AW; ESCMID Study Group of Epidemiological Markers (ESGEM).

Euro Surveill. 2013 Jan 24;18(4):20380. Review.

17.

Detection of Bacillus anthracis DNA by LightCycler PCR.

Bell CA, Uhl JR, Hadfield TL, David JC, Meyer RF, Smith TF, Cockerill FR 3rd.

J Clin Microbiol. 2002 Aug;40(8):2897-902.

18.

'Bioluminescent' reporter phage for the detection of Category A bacterial pathogens.

Schofield DA, Molineux IJ, Westwater C.

J Vis Exp. 2011 Jul 8;(53):e2740. doi: 10.3791/2740.

19.

[Screening and real-time quantitative detection for genomic signatures of Bacillus anthracis].

Rong GH, Xia Y, Zhu SY, Tong YM, Qi ZT.

Wei Sheng Wu Xue Bao. 2006 Dec;46(6):900-5. Chinese.

PMID:
17302151
20.

Identification of potential drug targets by subtractive genome analysis of Bacillus anthracis A0248: An in silico approach.

Rahman A, Noore S, Hasan A, Ullah R, Rahman H, Hossain A, Ali Y, Islam S.

Comput Biol Chem. 2014 Oct;52:66-72. doi: 10.1016/j.compbiolchem.2014.09.005. Epub 2014 Sep 18.

PMID:
25254941

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