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Items: 1 to 20 of 134

1.

Proteomic complex detection using sedimentation (ProCoDeS): screening for proteins in stable complexes and their candidate interaction partners.

Segura MP, Lilley KS, Dupree P.

Biochem Soc Trans. 2010 Aug;38(4):923-7. doi: 10.1042/BST0380923. Review.

PMID:
20658978
2.

Interaction proteomics: characterization of protein complexes using tandem affinity purification-mass spectrometry.

Völkel P, Le Faou P, Angrand PO.

Biochem Soc Trans. 2010 Aug;38(4):883-7. doi: 10.1042/BST0380883. Review.

PMID:
20658971
3.

Proteomic complex detection using sedimentation.

Hartman NT, Sicilia F, Lilley KS, Dupree P.

Anal Chem. 2007 Mar 1;79(5):2078-83.

PMID:
17326601
4.

Unraveling the dynamics of protein interactions with quantitative mass spectrometry.

Ramisetty SR, Washburn MP.

Crit Rev Biochem Mol Biol. 2011 Jun;46(3):216-28. doi: 10.3109/10409238.2011.567244. Review.

PMID:
21438726
5.

Identification of protein interacting partners using tandem affinity purification.

Bailey D, Urena L, Thorne L, Goodfellow I.

J Vis Exp. 2012 Feb 25;(60). pii: 3643. doi: 10.3791/3643.

6.

Identifying novel protein interactions: Proteomic methods, optimisation approaches and data analysis pipelines.

Carneiro DG, Clarke T, Davies CC, Bailey D.

Methods. 2016 Feb 15;95:46-54. doi: 10.1016/j.ymeth.2015.08.022. Review.

PMID:
26320829
7.

Discovery of protein complexes with core-attachment structures from Tandem Affinity Purification (TAP) data.

Wu M, Li XL, Kwoh CK, Ng SK, Wong L.

J Comput Biol. 2012 Sep;19(9):1027-42. doi: 10.1089/cmb.2010.0293.

8.

Predicting protein complexes by data integration of different types of interactions.

Tan PP, Dargahi D, Pio F.

Int J Comput Biol Drug Des. 2010;3(1):19-30. doi: 10.1504/IJCBDD.2010.034464.

PMID:
20693608
10.

Tandem affinity purification of protein complexes from mammalian cells by the Strep/FLAG (SF)-TAP tag.

Gloeckner CJ, Boldt K, Schumacher A, Ueffing M.

Methods Mol Biol. 2009;564:359-72. doi: 10.1007/978-1-60761-157-8_21.

PMID:
19544034
11.

Integrating mass spectrometry of intact protein complexes into structural proteomics.

Hyung SJ, Ruotolo BT.

Proteomics. 2012 May;12(10):1547-64. doi: 10.1002/pmic.201100520. Review.

12.

Bimolecular affinity purification: a variation of TAP with multiple applications.

Starokadomskyy P, Burstein E.

Methods Mol Biol. 2014;1177:193-209. doi: 10.1007/978-1-4939-1034-2_15.

PMID:
24943324
13.

Protein-protein interactions.

Williamson MP, Sutcliffe MJ.

Biochem Soc Trans. 2010 Aug;38(4):875-8. doi: 10.1042/BST0380875. Review.

PMID:
20658969
14.

Micropreparative fractionation of the complexome by blue native continuous elution electrophoresis.

Huang KY, Filarsky M, Padula MP, Raftery MJ, Herbert BR, Wilkins MR.

Proteomics. 2009 May;9(9):2494-502. doi: 10.1002/pmic.200800525.

PMID:
19343713
15.

Identifying protein complexes by affinity purification and mass spectrometry analysis in the rice blast fungus.

Liu W, Iliuk A, Tao A, Ding S.

Methods Mol Biol. 2011;722:157-66. doi: 10.1007/978-1-61779-040-9_11.

PMID:
21590419
16.

Computational detection of protein complexes in AP-MS experiments.

Choi H.

Proteomics. 2012 May;12(10):1663-8. doi: 10.1002/pmic.201100508. Review.

PMID:
22711593
18.

Dynamic proteomics in modeling of the living cell. Protein-protein interactions.

Terentiev AA, Moldogazieva NT, Shaitan KV.

Biochemistry (Mosc). 2009 Dec;74(13):1586-607. Review.

19.

Sequential peptide affinity purification system for the systematic isolation and identification of protein complexes from Escherichia coli.

Babu M, Butland G, Pogoutse O, Li J, Greenblatt JF, Emili A.

Methods Mol Biol. 2009;564:373-400. doi: 10.1007/978-1-60761-157-8_22.

PMID:
19544035
20.

Identifying novel protein complexes in cancer cells using epitope-tagging of endogenous human genes and affinity-purification mass spectrometry.

Song J, Hao Y, Du Z, Wang Z, Ewing RM.

J Proteome Res. 2012 Dec 7;11(12):5630-41. doi: 10.1021/pr300598t.

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