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Items: 1 to 20 of 103

1.

A comprehensive genome-wide map of autonomously replicating sequences in a naive genome.

Liachko I, Bhaskar A, Lee C, Chung SC, Tye BK, Keich U.

PLoS Genet. 2010 May 13;6(5):e1000946. doi: 10.1371/journal.pgen.1000946.

2.

Origin replication complex binding, nucleosome depletion patterns, and a primary sequence motif can predict origins of replication in a genome with epigenetic centromeres.

Tsai HJ, Baller JA, Liachko I, Koren A, Burrack LS, Hickman MA, Thevandavakkam MA, Rusche LN, Berman J.

MBio. 2014 Sep 2;5(5):e01703-14. doi: 10.1128/mBio.01703-14.

3.

Novel features of ARS selection in budding yeast Lachancea kluyveri.

Liachko I, Tanaka E, Cox K, Chung SC, Yang L, Seher A, Hallas L, Cha E, Kang G, Pace H, Barrow J, Inada M, Tye BK, Keich U.

BMC Genomics. 2011 Dec 28;12:633. doi: 10.1186/1471-2164-12-633.

4.
6.

Confidently estimating the number of DNA replication origins.

Bhaskar A, Keich U.

Stat Appl Genet Mol Biol. 2010;9:Article28. doi: 10.2202/1544-6115.1544. Epub 2010 Jul 2.

PMID:
20678076
7.

Prediction of Saccharomyces cerevisiae replication origins.

Breier AM, Chatterji S, Cozzarelli NR.

Genome Biol. 2004;5(4):R22. Epub 2004 Mar 4.

8.

Genome-wide hierarchy of replication origin usage in Saccharomyces cerevisiae.

Donato JJ, Chung SC, Tye BK.

PLoS Genet. 2006 Sep 8;2(9):e141. Epub 2006 Jul 25.

9.

Detection of replication origins using comparative genomics and recombinational ARS assay.

Nieduszynski CA, Donaldson AD.

Methods Mol Biol. 2009;521:295-313. doi: 10.1007/978-1-60327-815-7_16.

PMID:
19563113
10.

Identification of the sequences required for chromosomal replicator function in Kluyveromyces lactis.

Irene C, Maciariello C, Cioci F, Camilloni G, Newlon CS, Fabiani L.

Mol Microbiol. 2004 Mar;51(5):1413-23.

11.

The consensus sequence of Kluyveromyces lactis centromeres shows homology to functional centromeric DNA from Saccharomyces cerevisiae.

Heus JJ, Zonneveld BJ, de Steensma HY, van den Berg JA.

Mol Gen Genet. 1993 Jan;236(2-3):355-62.

PMID:
8437580
12.

A DNA replication origin and a replication fork barrier used in vivo in the circular plasmid pKD1.

Fabiani L, Irene C, Aragona M, Newlon CS.

Mol Genet Genomics. 2001 Oct;266(2):326-35.

PMID:
11683276
13.

Structure, replication efficiency and fragility of yeast ARS elements.

Dhar MK, Sehgal S, Kaul S.

Res Microbiol. 2012 May;163(4):243-53. doi: 10.1016/j.resmic.2012.03.003. Epub 2012 Mar 28. Review.

PMID:
22504206
14.
15.

Genome-wide identification of replication origins in yeast by comparative genomics.

Nieduszynski CA, Knox Y, Donaldson AD.

Genes Dev. 2006 Jul 15;20(14):1874-9.

16.

Asymmetry indices for analysis and prediction of replication origins in eukaryotic genomes.

Marsolier-Kergoat MC.

PLoS One. 2012;7(9):e45050. doi: 10.1371/journal.pone.0045050. Epub 2012 Sep 27.

18.

Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins.

Wyrick JJ, Aparicio JG, Chen T, Barnett JD, Jennings EG, Young RA, Bell SP, Aparicio OM.

Science. 2001 Dec 14;294(5550):2357-60.

20.

Random exploration of the Kluyveromyces lactis genome and comparison with that of Saccharomyces cerevisiae.

Ozier-Kalogeropoulos O, Malpertuy A, Boyer J, Tekaia F, Dujon B.

Nucleic Acids Res. 1998 Dec 1;26(23):5511-24.

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