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Items: 1 to 20 of 97

1.

Integrated phosphoproteomics analysis of a signaling network governing nutrient response and peroxisome induction.

Saleem RA, Rogers RS, Ratushny AV, Dilworth DJ, Shannon PT, Shteynberg D, Wan Y, Moritz RL, Nesvizhskii AI, Rachubinski RA, Aitchison JD.

Mol Cell Proteomics. 2010 Sep;9(9):2076-88. doi: 10.1074/mcp.M000116-MCP201.

2.

Quantitative phosphoproteomics in fatty acid stimulated Saccharomyces cerevisiae.

Saleem RA, Aitchison JD.

J Vis Exp. 2009 Oct 12;(32). pii: 1474. doi: 10.3791/1474.

3.

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.

Gruhler A, Olsen JV, Mohammed S, Mortensen P, Faergeman NJ, Mann M, Jensen ON.

Mol Cell Proteomics. 2005 Mar;4(3):310-27.

4.

Pip2p: a transcriptional regulator of peroxisome proliferation in the yeast Saccharomyces cerevisiae.

Rottensteiner H, Kal AJ, Filipits M, Binder M, Hamilton B, Tabak HF, Ruis H.

EMBO J. 1996 Jun 17;15(12):2924-34.

5.

Global analysis of phosphoproteome regulation by the Ser/Thr phosphatase Ppt1 in Saccharomyces cerevisiae.

Schreiber TB, Mäusbacher N, Soroka J, Wandinger SK, Buchner J, Daub H.

J Proteome Res. 2012 Apr 6;11(4):2397-408. doi: 10.1021/pr201134p.

PMID:
22369663
6.

Phosphoproteomic analysis of protein kinase C signaling in Saccharomyces cerevisiae reveals Slt2 mitogen-activated protein kinase (MAPK)-dependent phosphorylation of eisosome core components.

Mascaraque V, Hernáez ML, Jiménez-Sánchez M, Hansen R, Gil C, Martín H, Cid VJ, Molina M.

Mol Cell Proteomics. 2013 Mar;12(3):557-74. doi: 10.1074/mcp.M112.020438.

7.

Peroxisome biogenesis in Saccharomyces cerevisiae.

Kunau WH, Hartig A.

Antonie Van Leeuwenhoek. 1992 Aug;62(1-2):63-78. Review.

PMID:
1444337
8.

Towards systematic discovery of signaling networks in budding yeast filamentous growth stress response using interventional phosphorylation data.

Zhang Y, Kweon HK, Shively C, Kumar A, Andrews PC.

PLoS Comput Biol. 2013;9(6):e1003077. doi: 10.1371/journal.pcbi.1003077.

9.

Genome-wide analysis of signaling networks regulating fatty acid-induced gene expression and organelle biogenesis.

Saleem RA, Knoblach B, Mast FD, Smith JJ, Boyle J, Dobson CM, Long-O'Donnell R, Rachubinski RA, Aitchison JD.

J Cell Biol. 2008 Apr 21;181(2):281-92. doi: 10.1083/jcb.200710009.

10.

Identification and quantitation of signal molecule-dependent protein phosphorylation.

Groen A, Thomas L, Lilley K, Marondedze C.

Methods Mol Biol. 2013;1016:121-37. doi: 10.1007/978-1-62703-441-8_9.

PMID:
23681576
11.

Analytical strategies in mass spectrometry-based phosphoproteomics.

Rosenqvist H, Ye J, Jensen ON.

Methods Mol Biol. 2011;753:183-213. doi: 10.1007/978-1-61779-148-2_13.

PMID:
21604124
12.

A multidimensional chromatography technology for in-depth phosphoproteome analysis.

Albuquerque CP, Smolka MB, Payne SH, Bafna V, Eng J, Zhou H.

Mol Cell Proteomics. 2008 Jul;7(7):1389-96. doi: 10.1074/mcp.M700468-MCP200.

13.

Phosphoproteome profiling of human skin fibroblast cells in response to low- and high-dose irradiation.

Yang F, Stenoien DL, Strittmatter EF, Wang J, Ding L, Lipton MS, Monroe ME, Nicora CD, Gristenko MA, Tang K, Fang R, Adkins JN, Camp DG 2nd, Chen DJ, Smith RD.

J Proteome Res. 2006 May;5(5):1252-60.

PMID:
16674116
14.

Discovery of mouse spleen signaling responses to anthrax using label-free quantitative phosphoproteomics via mass spectrometry.

Manes NP, Dong L, Zhou W, Du X, Reghu N, Kool AC, Choi D, Bailey CL, Petricoin EF 3rd, Liotta LA, Popov SG.

Mol Cell Proteomics. 2011 Mar;10(3):M110.000927. doi: 10.1074/mcp.M110.000927.

15.

Global analysis of protein phosphorylation networks in insulin signaling by sequential enrichment of phosphoproteins and phosphopeptides.

Fedjaev M, Parmar A, Xu Y, Vyetrogon K, Difalco MR, Ashmarina M, Nifant'ev I, Posner BI, Pshezhetsky AV.

Mol Biosyst. 2012 Apr;8(5):1461-71. doi: 10.1039/c2mb05440j.

PMID:
22362066
16.
17.

The peroxisomal transporter gene ANT1 is regulated by a deviant oleate response element (ORE): characterization of the signal for fatty acid induction.

Rottensteiner H, Palmieri L, Hartig A, Hamilton B, Ruis H, Erdmann R, Gurvitz A.

Biochem J. 2002 Jul 1;365(Pt 1):109-17.

18.

Quantitative phosphoproteomics--an emerging key technology in signal-transduction research.

Schreiber TB, Mäusbacher N, Breitkopf SB, Grundner-Culemann K, Daub H.

Proteomics. 2008 Nov;8(21):4416-32. doi: 10.1002/pmic.200800132. Review.

PMID:
18837465
20.

Saccharomyces cerevisiae PIP2 mediating oleic acid induction and peroxisome proliferation is regulated by Adr1p and Pip2p-Oaf1p.

Rottensteiner H, Wabnegger L, Erdmann R, Hamilton B, Ruis H, Hartig A, Gurvitz A.

J Biol Chem. 2003 Jul 25;278(30):27605-11.

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