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Items: 1 to 20 of 95

1.

Laboratory methods for the analysis of primate mobile elements.

Ray DA, Han K, Walker JA, Batzer MA.

Methods Mol Biol. 2010;628:153-79. doi: 10.1007/978-1-60327-367-1_9.

2.

Genome-wide target site triplication of Alu elements in the human genome.

Lee W, Mun S, Kang K, Hennighausen L, Han K.

Gene. 2015 May 1;561(2):283-91. doi: 10.1016/j.gene.2015.02.052. Epub 2015 Feb 19.

PMID:
25701601
3.
4.

The (r)evolution of SINE versus LINE distributions in primate genomes: sex chromosomes are important.

Kvikstad EM, Makova KD.

Genome Res. 2010 May;20(5):600-13. doi: 10.1101/gr.099044.109. Epub 2010 Mar 10.

5.

Computational methods for the analysis of primate mobile elements.

Cordaux R, Sen SK, Konkel MK, Batzer MA.

Methods Mol Biol. 2010;628:137-51. doi: 10.1007/978-1-60327-367-1_8. Review.

6.

Comprehensive analysis of two Alu Yd subfamilies.

Xing J, Salem AH, Hedges DJ, Kilroy GE, Watkins WS, Schienman JE, Stewart CB, Jurka J, Jorde LB, Batzer MA.

J Mol Evol. 2003;57 Suppl 1:S76-89.

PMID:
15008405
7.

Non-traditional Alu evolution and primate genomic diversity.

Roy-Engel AM, Carroll ML, El-Sawy M, Salem AH, Garber RK, Nguyen SV, Deininger PL, Batzer MA.

J Mol Biol. 2002 Mar 8;316(5):1033-40.

PMID:
11884141
8.

Phylogenetic affinities of tarsier in the context of primate Alu repeats.

Zietkiewicz E, Richer C, Labuda D.

Mol Phylogenet Evol. 1999 Feb;11(1):77-83.

PMID:
10082612
9.

Mobile elements create structural variation: analysis of a complete human genome.

Xing J, Zhang Y, Han K, Salem AH, Sen SK, Huff CD, Zhou Q, Kirkness EF, Levy S, Batzer MA, Jorde LB.

Genome Res. 2009 Sep;19(9):1516-26. doi: 10.1101/gr.091827.109. Epub 2009 May 13.

10.

Identification of human-specific AluS elements through comparative genomics.

Lee J, Kim YJ, Mun S, Kim HS, Han K.

Gene. 2015 Jan 25;555(2):208-16. doi: 10.1016/j.gene.2014.11.005. Epub 2014 Nov 7.

PMID:
25447892
11.

Retrotransposable elements and human disease.

Callinan PA, Batzer MA.

Genome Dyn. 2006;1:104-15. doi: 10.1159/000092503. Review.

PMID:
18724056
12.

Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates.

van de Lagemaat LN, Gagnier L, Medstrand P, Mager DL.

Genome Res. 2005 Sep;15(9):1243-9.

13.

Mobile DNA elements in primate and human evolution.

Xing J, Witherspoon DJ, Ray DA, Batzer MA, Jorde LB.

Am J Phys Anthropol. 2007;Suppl 45:2-19. Review.

PMID:
18046749
14.

Alu retrotransposition-mediated deletion.

Callinan PA, Wang J, Herke SW, Garber RK, Liang P, Batzer MA.

J Mol Biol. 2005 May 13;348(4):791-800.

PMID:
15843013
15.

Comparative analysis of Alu repeats in primate genomes.

Liu GE, Alkan C, Jiang L, Zhao S, Eichler EE.

Genome Res. 2009 May;19(5):876-85. doi: 10.1101/gr.083972.108.

16.

Role of transposable elements in genomic rearrangement, evolution, gene regulation and epigenetics in primates.

Lee HE, Ayarpadikannan S, Kim HS.

Genes Genet Syst. 2015;90(5):245-57. doi: 10.1266/ggs.15-00016. Epub 2016 Jan 15. Review.

17.

Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity.

Carroll ML, Roy-Engel AM, Nguyen SV, Salem AH, Vogel E, Vincent B, Myers J, Ahmad Z, Nguyen L, Sammarco M, Watkins WS, Henke J, Makalowski W, Jorde LB, Deininger PL, Batzer MA.

J Mol Biol. 2001 Aug 3;311(1):17-40.

PMID:
11469855
18.

Recently integrated Alu elements and human genomic diversity.

Salem AH, Kilroy GE, Watkins WS, Jorde LB, Batzer MA.

Mol Biol Evol. 2003 Aug;20(8):1349-61. Epub 2003 May 30.

PMID:
12777511
19.

A novel web-based TinT application and the chronology of the Primate Alu retroposon activity.

Churakov G, Grundmann N, Kuritzin A, Brosius J, MakaƂowski W, Schmitz J.

BMC Evol Biol. 2010 Dec 2;10:376. doi: 10.1186/1471-2148-10-376.

20.

Under the genomic radar: the stealth model of Alu amplification.

Han K, Xing J, Wang H, Hedges DJ, Garber RK, Cordaux R, Batzer MA.

Genome Res. 2005 May;15(5):655-64.

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