Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 147

1.

An iterative identification procedure for dynamic modeling of biochemical networks.

Balsa-Canto E, Alonso AA, Banga JR.

BMC Syst Biol. 2010 Feb 17;4:11. doi: 10.1186/1752-0509-4-11.

2.
3.

Addressing parameter identifiability by model-based experimentation.

Raue A, Kreutz C, Maiwald T, Klingmuller U, Timmer J.

IET Syst Biol. 2011 Mar;5(2):120-30. doi: 10.1049/iet-syb.2010.0061.

PMID:
21405200
4.

Computational procedures for optimal experimental design in biological systems.

Balsa-Canto E, Alonso AA, Banga JR.

IET Syst Biol. 2008 Jul;2(4):163-72. doi: 10.1049/iet-syb:20070069.

PMID:
18681746
5.

Insights into the behaviour of systems biology models from dynamic sensitivity and identifiability analysis: a case study of an NF-kappaB signalling pathway.

Yue H, Brown M, Knowles J, Wang H, Broomhead DS, Kell DB.

Mol Biosyst. 2006 Dec;2(12):640-9. Epub 2006 Oct 23.

PMID:
17216045
6.
7.

A simple work flow for biologically inspired model reduction--application to early JAK-STAT signaling.

Quaiser T, Dittrich A, Schaper F, Mönnigmann M.

BMC Syst Biol. 2011 Feb 21;5:30. doi: 10.1186/1752-0509-5-30.

8.

Global identifiability of linear compartmental models--a computer algebra algorithm.

Audoly S, D'Angiò L, Saccomani MP, Cobelli C.

IEEE Trans Biomed Eng. 1998 Jan;45(1):36-47.

PMID:
9444838
9.

A general model-based design of experiments approach to achieve practical identifiability of pharmacokinetic and pharmacodynamic models.

Galvanin F, Ballan CC, Barolo M, Bezzo F.

J Pharmacokinet Pharmacodyn. 2013 Aug;40(4):451-67. doi: 10.1007/s10928-013-9321-5. Epub 2013 Jun 4.

PMID:
23733369
10.

Structural identifiability analysis of pharmacokinetic models using DAISY: semi-mechanistic gastric emptying models for 13C-octanoic acid.

Ogungbenro K, Aarons L.

J Pharmacokinet Pharmacodyn. 2011 Apr;38(2):279-92. doi: 10.1007/s10928-011-9193-5. Epub 2011 Feb 24.

PMID:
21347679
11.

Easy parameter identifiability analysis with COPASI.

Schaber J.

Biosystems. 2012 Dec;110(3):183-5. doi: 10.1016/j.biosystems.2012.09.003. Epub 2012 Oct 4.

PMID:
23041463
12.

Model-based inference of biochemical parameters and dynamic properties of microbial signal transduction networks.

Schaber J, Klipp E.

Curr Opin Biotechnol. 2011 Feb;22(1):109-16. doi: 10.1016/j.copbio.2010.09.014. Epub 2010 Oct 20. Review.

PMID:
20970318
13.

Evolutionary optimization with data collocation for reverse engineering of biological networks.

Tsai KY, Wang FS.

Bioinformatics. 2005 Apr 1;21(7):1180-8. Epub 2004 Oct 28.

PMID:
15513993
14.

Iterative approach to model identification of biological networks.

Gadkar KG, Gunawan R, Doyle FJ 3rd.

BMC Bioinformatics. 2005 Jun 20;6:155.

15.

Cellular signaling identifiability analysis: a case study.

Roper RT, Pia Saccomani M, Vicini P.

J Theor Biol. 2010 May 21;264(2):528-37. doi: 10.1016/j.jtbi.2010.02.029. Epub 2010 Feb 24.

PMID:
20188743
16.

On a systematic procedure for the predetermination of macroscopic reaction schemes.

Hulhoven X, Vande Wouwer A, Bogaerts P.

Bioprocess Biosyst Eng. 2005 Aug;27(5):283-91. Epub 2005 Jul 2.

PMID:
15995851
17.

Identification in an anaerobic batch system: global sensitivity analysis, multi-start strategy and optimization criterion selection.

Donoso-Bravo A, Mailier J, Ruiz-Filippi G, Vande Wouwer A.

Bioprocess Biosyst Eng. 2013 Jan;36(1):35-43. doi: 10.1007/s00449-012-0758-5. Epub 2012 Jun 1.

PMID:
22653035
18.

Data-based identifiability analysis of non-linear dynamical models.

Hengl S, Kreutz C, Timmer J, Maiwald T.

Bioinformatics. 2007 Oct 1;23(19):2612-8. Epub 2007 Jul 28.

PMID:
17660526
19.

Structural identifiability of PBPK models: practical consequences for modeling strategies and study designs.

Slob W, Janssen PH, van den Hof JM.

Crit Rev Toxicol. 1997 May;27(3):261-72. Review.

PMID:
9189655
20.

AMIGO, a toolbox for advanced model identification in systems biology using global optimization.

Balsa-Canto E, Banga JR.

Bioinformatics. 2011 Aug 15;27(16):2311-3. doi: 10.1093/bioinformatics/btr370. Epub 2011 Jun 17.

Supplemental Content

Support Center