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Items: 1 to 20 of 78

1.

Dynamic changes in the human methylome during differentiation.

Laurent L, Wong E, Li G, Huynh T, Tsirigos A, Ong CT, Low HM, Kin Sung KW, Rigoutsos I, Loring J, Wei CL.

Genome Res. 2010 Mar;20(3):320-31. doi: 10.1101/gr.101907.109. Epub 2010 Feb 4.

2.

Defining hypo-methylated regions of stem cell-specific promoters in human iPS cells derived from extra-embryonic amnions and lung fibroblasts.

Nishino K, Toyoda M, Yamazaki-Inoue M, Makino H, Fukawatase Y, Chikazawa E, Takahashi Y, Miyagawa Y, Okita H, Kiyokawa N, Akutsu H, Umezawa A.

PLoS One. 2010 Sep 27;5(9):e13017. doi: 10.1371/journal.pone.0013017.

3.

Genome-scale DNA methylation maps of pluripotent and differentiated cells.

Meissner A, Mikkelsen TS, Gu H, Wernig M, Hanna J, Sivachenko A, Zhang X, Bernstein BE, Nusbaum C, Jaffe DB, Gnirke A, Jaenisch R, Lander ES.

Nature. 2008 Aug 7;454(7205):766-70. doi: 10.1038/nature07107. Epub 2008 Jul 6.

4.

Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver.

Brunner AL, Johnson DS, Kim SW, Valouev A, Reddy TE, Neff NF, Anton E, Medina C, Nguyen L, Chiao E, Oyolu CB, Schroth GP, Absher DM, Baker JC, Myers RM.

Genome Res. 2009 Jun;19(6):1044-56. doi: 10.1101/gr.088773.108. Epub 2009 Mar 9.

5.

A comparative analysis of DNA methylation across human embryonic stem cell lines.

Chen PY, Feng S, Joo JW, Jacobsen SE, Pellegrini M.

Genome Biol. 2011 Jul 6;12(7):R62. doi: 10.1186/gb-2011-12-7-r62.

6.

Developmentally programmed 3' CpG island methylation confers tissue- and cell-type-specific transcriptional activation.

Yu DH, Ware C, Waterland RA, Zhang J, Chen MH, Gadkari M, Kunde-Ramamoorthy G, Nosavanh LM, Shen L.

Mol Cell Biol. 2013 May;33(9):1845-58. doi: 10.1128/MCB.01124-12. Epub 2013 Mar 4.

7.

Abnormal CpG island methylation occurs during in vitro differentiation of human embryonic stem cells.

Shen Y, Chow J, Wang Z, Fan G.

Hum Mol Genet. 2006 Sep 1;15(17):2623-35. Epub 2006 Jul 26.

PMID:
16870691
8.

Human DNA methylomes at base resolution show widespread epigenomic differences.

Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR.

Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14.

9.

Epigenetics: the study of embryonic stem cells by restriction landmark genomic scanning.

Hattori N, Shiota K.

FEBS J. 2008 Apr;275(8):1624-30. doi: 10.1111/j.1742-4658.2008.06331.x. Epub 2008 Mar 7. Review.

10.

Lineage-specific promoter DNA methylation patterns segregate adult progenitor cell types.

Sørensen AL, Timoskainen S, West FD, Vekterud K, Boquest AC, Ahrlund-Richter L, Stice SL, Collas P.

Stem Cells Dev. 2010 Aug;19(8):1257-66. doi: 10.1089/scd.2009.0309.

PMID:
19886822
11.

Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development.

Liang P, Song F, Ghosh S, Morien E, Qin M, Mahmood S, Fujiwara K, Igarashi J, Nagase H, Held WA.

BMC Genomics. 2011 May 11;12(1):231. doi: 10.1186/1471-2164-12-231.

12.

Formation of an active tissue-specific chromatin domain initiated by epigenetic marking at the embryonic stem cell stage.

Szutorisz H, Canzonetta C, Georgiou A, Chow CM, Tora L, Dillon N.

Mol Cell Biol. 2005 Mar;25(5):1804-20.

13.

Relationships between DNA methylation and expression in erythrocyte membrane protein (band 3, protein 4.2, and beta-spectrin) genes during human erythroid development and differentiation.

Remus R, Kanzaki A, Yawata A, Wada H, Nakanishi H, Sugihara T, Zeschnigk M, Zuther I, Schmitz B, Naumann F, Doerfler W, Yawata Y.

Int J Hematol. 2005 Dec;82(5):422-9.

PMID:
16533746
14.

Promoter DNA methylation patterns of differentiated cells are largely programmed at the progenitor stage.

Sørensen AL, Jacobsen BM, Reiner AH, Andersen IS, Collas P.

Mol Biol Cell. 2010 Jun 15;21(12):2066-77. doi: 10.1091/mbc.E10-01-0018. Epub 2010 Apr 21.

15.

Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing.

Guo H, Zhu P, Wu X, Li X, Wen L, Tang F.

Genome Res. 2013 Dec;23(12):2126-35. doi: 10.1101/gr.161679.113. Epub 2013 Oct 31.

16.

Transitional CpG methylation between promoters and retroelements of tissue-specific genes during human mesenchymal cell differentiation.

Kang MI, Kim HS, Jung YC, Kim YH, Hong SJ, Kim MK, Baek KH, Kim CC, Rhyu MG.

J Cell Biochem. 2007 Sep 1;102(1):224-39.

PMID:
17352407
17.

CpG methylation patterns in the IFNgamma promoter in naive T cells: variations during Th1 and Th2 differentiation and between atopics and non-atopics.

White GP, Hollams EM, Yerkovich ST, Bosco A, Holt BJ, Bassami MR, Kusel M, Sly PD, Holt PG.

Pediatr Allergy Immunol. 2006 Dec;17(8):557-64.

PMID:
17121582
18.

A human B cell methylome at 100-base pair resolution.

Rauch TA, Wu X, Zhong X, Riggs AD, Pfeifer GP.

Proc Natl Acad Sci U S A. 2009 Jan 20;106(3):671-8. doi: 10.1073/pnas.0812399106. Epub 2009 Jan 12.

19.

Global epiproteomic signatures distinguish embryonic stem cells from differentiated cells.

Dai B, Rasmussen TP.

Stem Cells. 2007 Oct;25(10):2567-74. Epub 2007 Jul 19.

20.

Dynamic regulation of DNA methylation during mammalian development.

Guibert S, Forné T, Weber M.

Epigenomics. 2009 Oct;1(1):81-98. doi: 10.2217/epi.09.5. Review.

PMID:
22122638

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