Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 100

1.

Parsimony accelerated maximum likelihood searches.

Sundberg K, O'Connor T, Carroll H, Clement M, Snell Q.

Int J Comput Biol Drug Des. 2008;1(1):74-87.

PMID:
20055002
2.
4.

Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood.

Hordijk W, Gascuel O.

Bioinformatics. 2005 Dec 15;21(24):4338-47. Epub 2005 Oct 18.

PMID:
16234323
5.

Evaluating the performance of a successive-approximations approach to parameter optimization in maximum-likelihood phylogeny estimation.

Sullivan J, Abdo Z, Joyce P, Swofford DL.

Mol Biol Evol. 2005 Jun;22(6):1386-92. Epub 2005 Mar 9.

PMID:
15758203
6.

Ancestral sequence alignment under optimal conditions.

Hudek AK, Brown DG.

BMC Bioinformatics. 2005 Nov 17;6:273.

7.

NJML: a hybrid algorithm for the neighbor-joining and maximum-likelihood methods.

Ota S, Li WH.

Mol Biol Evol. 2000 Sep;17(9):1401-9.

PMID:
10958856
9.
10.

MultiPhyl: a high-throughput phylogenomics webserver using distributed computing.

Keane TM, Naughton TJ, McInerney JO.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W33-7. Epub 2007 Jun 6.

11.

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees.

Stamatakis A, Ludwig T, Meier H.

Bioinformatics. 2005 Feb 15;21(4):456-63. Epub 2004 Dec 17.

PMID:
15608047
12.

Upper bounds on maximum likelihood for phylogenetic trees.

Hendy MD, Holland BR.

Bioinformatics. 2003 Oct;19 Suppl 2:ii66-72.

PMID:
14534174
13.

Reconstructing phylogeny by quadratically approximated maximum likelihood.

Woodhams MD, Hendy MD.

Bioinformatics. 2004 Aug 4;20 Suppl 1:i348-54.

PMID:
15262819
14.

Outgroup misplacement and phylogenetic inaccuracy under a molecular clock--a simulation study.

Holland BR, Penny D, Hendy MD.

Syst Biol. 2003 Apr;52(2):229-38.

PMID:
12746148
17.
18.

Phylogenetic analysis using parsimony and likelihood methods.

Yang Z.

J Mol Evol. 1996 Feb;42(2):294-307.

PMID:
8919881
19.
20.

fastDNAmL: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood.

Olsen GJ, Matsuda H, Hagstrom R, Overbeek R.

Comput Appl Biosci. 1994 Feb;10(1):41-8.

PMID:
8193955

Supplemental Content

Support Center