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Items: 1 to 20 of 314

1.

Comparison of linkage disequilibrium and haplotype diversity on macro- and microchromosomes in chicken.

Megens HJ, Crooijmans RP, Bastiaansen JW, Kerstens HH, Coster A, Jalving R, Vereijken A, Silva P, Muir WM, Cheng HH, Hanotte O, Groenen MA.

BMC Genet. 2009 Dec 20;10:86. doi: 10.1186/1471-2156-10-86.

2.

Linkage disequilibrium reveals different demographic history in egg laying chickens.

Qanbari S, Hansen M, Weigend S, Preisinger R, Simianer H.

BMC Genet. 2010 Nov 15;11:103. doi: 10.1186/1471-2156-11-103.

3.

SNP detection and prediction of variability between chicken lines using genome resequencing of DNA pools.

Marklund S, Carlborg O.

BMC Genomics. 2010 Nov 25;11:665. doi: 10.1186/1471-2164-11-665.

4.

Linkage disequilibrium in crossbred and pure line chickens.

Fu W, Dekkers JC, Lee WR, Abasht B.

Genet Sel Evol. 2015 Feb 26;47:11. doi: 10.1186/s12711-015-0098-4.

5.

High-resolution haplotype block structure in the cattle genome.

Villa-Angulo R, Matukumalli LK, Gill CA, Choi J, Van Tassell CP, Grefenstette JJ.

BMC Genet. 2009 Apr 24;10:19. doi: 10.1186/1471-2156-10-19.

6.

Linkage disequilibrium sharing and haplotype-tagged SNP portability between populations.

Huang W, He Y, Wang H, Wang Y, Liu Y, Wang Y, Chu X, Wang Y, Xu L, Shen Y, Xiong X, Li H, Wen B, Qian J, Yuan W, Zhang C, Wang Y, Jiang H, Zhao G, Chen Z, Jin L.

Proc Natl Acad Sci U S A. 2006 Jan 31;103(5):1418-21.

7.

A worldwide survey of haplotype variation and linkage disequilibrium in the human genome.

Conrad DF, Jakobsson M, Coop G, Wen X, Wall JD, Rosenberg NA, Pritchard JK.

Nat Genet. 2006 Nov;38(11):1251-60.

PMID:
17057719
8.

High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle.

Marques E, Schnabel RD, Stothard P, Kolbehdari D, Wang Z, Taylor JF, Moore SS.

BMC Genet. 2008 Jul 8;9:45. doi: 10.1186/1471-2156-9-45.

9.

SNP identification, linkage disequilibrium, and haplotype analysis for a 200-kb genomic region in a Korean population.

Kim KJ, Lee HJ, Park MH, Cha SH, Kim KS, Kim HT, Kimm K, Oh B, Lee JY.

Genomics. 2006 Nov;88(5):535-40.

10.

Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 million years of divergence.

Kayang BB, Fillon V, Inoue-Murayama M, Miwa M, Leroux S, Fève K, Monvoisin JL, Pitel F, Vignoles M, Mouilhayrat C, Beaumont C, Ito S, Minvielle F, Vignal A.

BMC Genomics. 2006 May 2;7:101.

11.

Linkage disequilibrium decay and haplotype block structure in the pig.

Amaral AJ, Megens HJ, Crooijmans RP, Heuven HC, Groenen MA.

Genetics. 2008 May;179(1):569-79. doi: 10.1534/genetics.107.084277.

12.

Extent of linkage disequilibrium in wild and domestic chicken populations.

Rao YS, Liang Y, Xia MN, Shen X, Du YJ, Luo CG, Nie QH, Zeng H, Zhang XQ.

Hereditas. 2008 Oct;145(5):251-7. doi: 10.1111/j.1601-5223.2008.02043.x.

13.
14.

Linkage disequilibrium in related breeding lines of chickens.

Andreescu C, Avendano S, Brown SR, Hassen A, Lamont SJ, Dekkers JC.

Genetics. 2007 Dec;177(4):2161-9.

15.

The development and characterization of a 60K SNP chip for chicken.

Groenen MA, Megens HJ, Zare Y, Warren WC, Hillier LW, Crooijmans RP, Vereijken A, Okimoto R, Muir WM, Cheng HH.

BMC Genomics. 2011 May 31;12(1):274. doi: 10.1186/1471-2164-12-274.

16.

Similarity in recombination rate and linkage disequilibrium at CYP2C and CYP2D cytochrome P450 gene regions among Europeans indicates signs of selection and no advantage of using tagSNPs in population isolates.

Pimenoff VN, Laval G, Comas D, Palo JU, Gut I, Cann H, Excoffier L, Sajantila A.

Pharmacogenet Genomics. 2012 Dec;22(12):846-57. doi: 10.1097/FPC.0b013e32835a3a6d.

PMID:
23089684
17.

Pronounced inter- and intrachromosomal variation in linkage disequilibrium across the zebra finch genome.

Stapley J, Birkhead TR, Burke T, Slate J.

Genome Res. 2010 Apr;20(4):496-502. doi: 10.1101/gr.102095.109.

18.

PKLR- GBA region shows almost complete linkage disequilibrium over 70 kb in a set of worldwide populations.

Mateu E, Pérez-Lezaun A, Martínez-Arias R, Andrés A, Vallés M, Bertranpetit J, Calafell F.

Hum Genet. 2002 Jun;110(6):532-44.

PMID:
12107439
19.

Strong linkage disequilibrium at the nucleotide analogue transporter ABCC5 gene locus.

Gwee PC, Tang K, Sew PH, Lee EJ, Chong SS, Lee CG.

Pharmacogenet Genomics. 2005 Feb;15(2):91-104.

PMID:
15861033
20.
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