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Items: 1 to 20 of 179

1.

Deciphering the transcriptional circuitry of microRNA genes expressed during human monocytic differentiation.

Schmeier S, MacPherson CR, Essack M, Kaur M, Schaefer U, Suzuki H, Hayashizaki Y, Bajic VB.

BMC Genomics. 2009 Dec 10;10:595. doi: 10.1186/1471-2164-10-595.

2.

Inter- and intra-combinatorial regulation by transcription factors and microRNAs.

Zhou Y, Ferguson J, Chang JT, Kluger Y.

BMC Genomics. 2007 Oct 30;8:396.

3.

Network analysis of microRNAs and their regulation in human ovarian cancer.

Schmeier S, Schaefer U, Essack M, Bajic VB.

BMC Syst Biol. 2011 Nov 3;5:183. doi: 10.1186/1752-0509-5-183.

4.

Inferring coregulation of transcription factors and microRNAs in breast cancer.

Wu JH, Sun YJ, Hsieh PH, Shieh GS.

Gene. 2013 Apr 10;518(1):139-44. doi: 10.1016/j.gene.2012.11.056.

PMID:
23246694
5.

Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs.

Croft L, Szklarczyk D, Jensen LJ, Gorodkin J.

BMC Syst Biol. 2012 Jul 23;6:90. doi: 10.1186/1752-0509-6-90.

6.

Computational discovery of miR-TF regulatory modules in human genome.

Tran DH, Satou K, Ho TB, Pham TH.

Bioinformation. 2010 Feb 28;4(8):371-7.

7.

TransmiR: a transcription factor-microRNA regulation database.

Wang J, Lu M, Qiu C, Cui Q.

Nucleic Acids Res. 2010 Jan;38(Database issue):D119-22. doi: 10.1093/nar/gkp803.

8.

Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability.

Licausi F, Weits DA, Pant BD, Scheible WR, Geigenberger P, van Dongen JT.

New Phytol. 2011 Apr;190(2):442-56. doi: 10.1111/j.1469-8137.2010.03451.x.

9.
10.

Uncovering MicroRNA and Transcription Factor Mediated Regulatory Networks in Glioblastoma.

Sun J, Gong X, Purow B, Zhao Z.

PLoS Comput Biol. 2012;8(7):e1002488. doi: 10.1371/journal.pcbi.1002488.

11.

Profiling microRNA expression in bovine alveolar macrophages using RNA-seq.

Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ.

Vet Immunol Immunopathol. 2013 Oct 1;155(4):238-44. doi: 10.1016/j.vetimm.2013.08.004.

PMID:
24021155
12.

PuTmiR: a database for extracting neighboring transcription factors of human microRNAs.

Bandyopadhyay S, Bhattacharyya M.

BMC Bioinformatics. 2010 Apr 15;11:190. doi: 10.1186/1471-2105-11-190.

13.

Evolutionary emergence of microRNAs in human embryonic stem cells.

Cao H, Yang CS, Rana TM.

PLoS One. 2008 Jul 30;3(7):e2820. doi: 10.1371/journal.pone.0002820.

14.

MIRTFnet: analysis of miRNA regulated transcription factors.

Naeem H, K├╝ffner R, Zimmer R.

PLoS One. 2011;6(8):e22519. doi: 10.1371/journal.pone.0022519.

15.

Systematic analysis of regulation and functions of co-expressed microRNAs in humans.

Liao M, Jiang W, Chen X, Lian B, Li W, Lv Y, Wang Y, Wang S, Li X.

Mol Biosyst. 2010 Oct;6(10):1863-72. doi: 10.1039/b926947a.

PMID:
20548996
16.

Microarray profiling of monocytic differentiation reveals miRNA-mRNA intrinsic correlation.

Wang J, Xiang G, Mitchelson K, Zhou Y.

J Cell Biochem. 2011 Sep;112(9):2443-53. doi: 10.1002/jcb.23165.

PMID:
21538479
17.

Regulatory coordination of clustered microRNAs based on microRNA-transcription factor regulatory network.

Wang J, Haubrock M, Cao KM, Hua X, Zhang CY, Wingender E, Li J.

BMC Syst Biol. 2011 Dec 16;5:199. doi: 10.1186/1752-0509-5-199.

18.

Transcriptional fine-tuning of microRNA-223 levels directs lineage choice of human hematopoietic progenitors.

Vian L, Di Carlo M, Pelosi E, Fazi F, Santoro S, Cerio AM, Boe A, Rotilio V, Billi M, Racanicchi S, Testa U, Grignani F, Nervi C.

Cell Death Differ. 2014 Feb;21(2):290-301. doi: 10.1038/cdd.2013.145.

19.

MicroRNA genes preferentially expressed in dendritic cells contain sites for conserved transcription factor binding motifs in their promoters.

Jansen BJ, Sama IE, Eleveld-Trancikova D, van Hout-Kuijer MA, Jansen JH, Huynen MA, Adema GJ.

BMC Genomics. 2011 Jun 27;12:330. doi: 10.1186/1471-2164-12-330.

20.

Analyzing miRNA co-expression networks to explore TF-miRNA regulation.

Bandyopadhyay S, Bhattacharyya M.

BMC Bioinformatics. 2009 May 28;10:163. doi: 10.1186/1471-2105-10-163.

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