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Items: 1 to 20 of 137

1.

Genomic Sequence Variation Markup Language (GSVML).

Nakaya J, Kimura M, Hiroi K, Ido K, Yang W, Tanaka H.

Int J Med Inform. 2010 Feb;79(2):130-42. doi: 10.1016/j.ijmedinf.2009.11.003. Epub 2009 Dec 6.

PMID:
19969503
2.

Interface analysis between GSVML and HL7 version 3.

Hiroi K, Ido K, Yang W, Nakaya J.

J Biomed Inform. 2007 Oct;40(5):527-38. Epub 2006 Dec 24.

4.

Curation of viral genomes: challenges, applications and the way forward.

Kulkarni-Kale U, Bhosle SG, Manjari GS, Joshi M, Bansode S, Kolaskar AS.

BMC Bioinformatics. 2006 Dec 18;7 Suppl 5:S12.

5.

Web-based infectious disease reporting using XML forms.

Liu D, Wang X, Pan F, Xu Y, Yang P, Rao K.

Int J Med Inform. 2008 Sep;77(9):630-40. Epub 2007 Dec 3.

PMID:
18060833
6.

HGVbase: a human sequence variation database emphasizing data quality and a broad spectrum of data sources.

Fredman D, Siegfried M, Yuan YP, Bork P, Lehväslaiho H, Brookes AJ.

Nucleic Acids Res. 2002 Jan 1;30(1):387-91.

7.

The development of MML (Medical Markup Language) version 3.0 as a medical document exchange format for HL7 messages.

Guo J, Takada A, Tanaka K, Sato J, Suzuki M, Suzuki T, Nakashima Y, Araki K, Yoshihara H.

J Med Syst. 2004 Dec;28(6):523-33.

PMID:
15615281
8.

LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.

Karchin R, Diekhans M, Kelly L, Thomas DJ, Pieper U, Eswar N, Haussler D, Sali A.

Bioinformatics. 2005 Jun 15;21(12):2814-20. Epub 2005 Apr 12.

PMID:
15827081
9.

SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.

Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C.

Bioinformatics. 2007 Jul 1;23(13):i387-91.

PMID:
17646321
10.

Dynamic variable selection in SNP genotype autocalling from APEX microarray data.

Podder M, Welch WJ, Zamar RH, Tebbutt SJ.

BMC Bioinformatics. 2006 Nov 30;7:521.

11.

Design and implementation of a web-based HL7 message generation and validation system.

Huang EW, Hsiao SH, Liou DM.

Int J Med Inform. 2003 Apr;70(1):49-58.

PMID:
12706182
12.

An XML-based interchange format for genotype-phenotype data.

Whirl-Carrillo M, Woon M, Thorn CF, Klein TE, Altman RB.

Hum Mutat. 2008 Feb;29(2):212-9.

PMID:
17994540
13.

SSCP-SNP in pearl millet--a new marker system for comparative genetics.

Bertin I, Zhu JH, Gale MD.

Theor Appl Genet. 2005 May;110(8):1467-72. Epub 2005 Apr 5.

PMID:
15809850
14.

MedRefSNP: a database of medically investigated SNPs.

Rhee H, Lee JS.

Hum Mutat. 2009 Mar;30(3):E460-6. doi: 10.1002/humu.20914.

PMID:
19105187
15.

PIML: the Pathogen Information Markup Language.

He Y, Vines RR, Wattam AR, Abramochkin GV, Dickerman AW, Eckart JD, Sobral BW.

Bioinformatics. 2005 Jan 1;21(1):116-21. Epub 2004 Aug 5.

PMID:
15297293
16.

Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'.

Kuhn A, Luthi-Carter R, Delorenzi M.

BMC Bioinformatics. 2008 Jan 17;9:26. doi: 10.1186/1471-2105-9-26.

17.

An XML message broker framework for exchange and integration of microarray data.

Tjandra D, Wong S, Shen W, Pulliam B, Yu E, Esserman L.

Bioinformatics. 2003 Sep 22;19(14):1844-5.

PMID:
14512357
18.

Pathology data integration with eXtensible Markup Language.

Berman JJ.

Hum Pathol. 2005 Feb;36(2):139-45. Review.

PMID:
15754290
19.

Processing sequence annotation data using the Lua programming language.

Ueno Y, Arita M, Kumagai T, Asai K.

Genome Inform. 2003;14:154-63.

PMID:
15706530
20.

Current bioinformatics tools in genomic biomedical research (Review).

Teufel A, Krupp M, Weinmann A, Galle PR.

Int J Mol Med. 2006 Jun;17(6):967-73. Review.

PMID:
16685403

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