Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 166


Angiosperm genome comparisons reveal early polyploidy in the monocot lineage.

Tang H, Bowers JE, Wang X, Paterson AH.

Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):472-7. doi: 10.1073/pnas.0908007107. Epub 2009 Dec 4.


A Phylogenomic Assessment of Ancient Polyploidy and Genome Evolution across the Poales.

McKain MR, Tang H, McNeal JR, Ayyampalayam S, Davis JI, dePamphilis CW, Givnish TJ, Pires JC, Stevenson DW, Leebens-Mack JH.

Genome Biol Evol. 2016 Apr 21;8(4):1150-64. doi: 10.1093/gbe/evw060.


Integrated syntenic and phylogenomic analyses reveal an ancient genome duplication in monocots.

Jiao Y, Li J, Tang H, Paterson AH.

Plant Cell. 2014 Jul;26(7):2792-802. doi: 10.1105/tpc.114.127597. Epub 2014 Jul 31.


Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics.

Paterson AH, Bowers JE, Chapman BA.

Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9903-8. Epub 2004 May 25.


A genome triplication associated with early diversification of the core eudicots.

Jiao Y, Leebens-Mack J, Ayyampalayam S, Bowers JE, McKain MR, McNeal J, Rolf M, Ruzicka DR, Wafula E, Wickett NJ, Wu X, Zhang Y, Wang J, Zhang Y, Carpenter EJ, Deyholos MK, Kutchan TM, Chanderbali AS, Soltis PS, Stevenson DW, McCombie R, Pires JC, Wong GK, Soltis DE, Depamphilis CW.

Genome Biol. 2012 Jan 26;13(1):R3. doi: 10.1186/gb-2012-13-1-r3.


Molecular evidence for asymmetric evolution of sister duplicated blocks after cereal polyploidy.

Wang H, Yu L, Lai F, Liu L, Wang J.

Plant Mol Biol. 2005 Sep;59(1):63-74.


Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps.

Tang H, Wang X, Bowers JE, Ming R, Alam M, Paterson AH.

Genome Res. 2008 Dec;18(12):1944-54. doi: 10.1101/gr.080978.108. Epub 2008 Oct 2.


Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events.

Bowers JE, Chapman BA, Rong J, Paterson AH.

Nature. 2003 Mar 27;422(6930):433-8.


Widespread genome duplications throughout the history of flowering plants.

Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, dePamphilis CW.

Genome Res. 2006 Jun;16(6):738-49. Epub 2006 May 15.


Syntenic block overlap multiplicities with a panel of reference genomes provide a signature of ancient polyploidization events.

Zheng C, Santos Muñoz D, Albert VA, Sankoff D.

BMC Genomics. 2015;16 Suppl 10:S8. doi: 10.1186/1471-2164-16-S10-S8. Epub 2015 Oct 2.


Insights into the Musa genome: syntenic relationships to rice and between Musa species.

Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, da Silva FR, Santos CM, D'Hont A, Garsmeur O, Vilarinhos AD, Kanamori H, Matsumoto T, Ronning CM, Cheung F, Haas BJ, Althoff R, Arbogast T, Hine E, Pappas GJ Jr, Sasaki T, Souza MT Jr, Miller RN, Glaszmann JC, Town CD.

BMC Genomics. 2008 Jan 30;9:58. doi: 10.1186/1471-2164-9-58.


Evidence that rice and other cereals are ancient aneuploids.

Vandepoele K, Simillion C, Van de Peer Y.

Plant Cell. 2003 Sep;15(9):2192-202.


Evidence for an ancient whole-genome duplication event in rice and other cereals.

Tian CG, Xiong YQ, Liu TY, Sun SH, Chen LB, Chen MS.

Yi Chuan Xue Bao. 2005 May;32(5):519-27.


Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots.

Xiong Y, Liu T, Tian C, Sun S, Li J, Chen M.

Plant Mol Biol. 2005 Sep;59(1):191-203.


Ancestral polyploidy in seed plants and angiosperms.

Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, Soltis DE, Clifton SW, Schlarbaum SE, Schuster SC, Ma H, Leebens-Mack J, dePamphilis CW.

Nature. 2011 May 5;473(7345):97-100. doi: 10.1038/nature09916. Epub 2011 Apr 10.


Comparative inference of illegitimate recombination between rice and sorghum duplicated genes produced by polyploidization.

Wang X, Tang H, Bowers JE, Paterson AH.

Genome Res. 2009 Jun;19(6):1026-32. doi: 10.1101/gr.087288.108. Epub 2009 Apr 16.


High time for a roll call: gene duplication and phylogenetic relationships of TCP-like genes in monocots.

Mondragón-Palomino M, Trontin C.

Ann Bot. 2011 Jun;107(9):1533-44. doi: 10.1093/aob/mcr059. Epub 2011 Mar 28.


Phylogenetic footprint of the plant clock system in angiosperms: evolutionary processes of pseudo-response regulators.

Takata N, Saito S, Saito CT, Uemura M.

BMC Evol Biol. 2010 May 1;10:126. doi: 10.1186/1471-2148-10-126.


Use of genomic history to improve phylogeny and understanding of births and deaths in a gene family.

Sampedro J, Lee Y, Carey RE, dePamphilis C, Cosgrove DJ.

Plant J. 2005 Nov;44(3):409-19.


Synteny and collinearity in plant genomes.

Tang H, Bowers JE, Wang X, Ming R, Alam M, Paterson AH.

Science. 2008 Apr 25;320(5875):486-8. doi: 10.1126/science.1153917.


Supplemental Content

Support Center