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Items: 1 to 20 of 92

1.

Variability of DNA microarray gene expression profiles in cultured rat primary hepatocytes.

Xu J, Deng X, Chan V, Kelley-Loughnane N, Harker BW, Shi L, Hussain SM, Frazier JM, Wang C.

Gene Regul Syst Bio. 2007 Nov 18;1:235-49.

2.

Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium.

Tan Y, Shi L, Hussain SM, Xu J, Tong W, Frazier JM, Wang C.

Bioinformatics. 2006 Jan 1;22(1):77-87. Epub 2005 Oct 25.

PMID:
16249259
3.

Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

Seo J, Bakay M, Chen YW, Hilmer S, Shneiderman B, Hoffman EP.

Bioinformatics. 2004 Nov 1;20(16):2534-44. Epub 2004 Apr 29.

PMID:
15117752
4.

Characterization of variability in large-scale gene expression data: implications for study design.

Novak JP, Sladek R, Hudson TJ.

Genomics. 2002 Jan;79(1):104-13.

PMID:
11827463
5.

Feasibility of a liver transcriptomics approach to assess bovine treatment with the prohormone dehydroepiandrosterone (DHEA).

Rijk JC, Peijnenburg AA, Hendriksen PJ, Van Hende JM, Groot MJ, Nielen MW.

BMC Vet Res. 2010 Sep 16;6:44. doi: 10.1186/1746-6148-6-44.

6.

Analysis of variance components in gene expression data.

Chen JJ, Delongchamp RR, Tsai CA, Hsueh HM, Sistare F, Thompson KL, Desai VG, Fuscoe JC.

Bioinformatics. 2004 Jun 12;20(9):1436-46. Epub 2004 Feb 12.

PMID:
14962916
7.

Microarray reveals complement components are regulated in the serum-deprived rat retinal ganglion cell line.

Khalyfa A, Chlon T, Qiang H, Agarwal N, Cooper NG.

Mol Vis. 2007 Feb 28;13:293-308.

8.

Gene expression analysis in clear cell renal cell carcinoma using gene set enrichment analysis for biostatistical management.

Maruschke M, Reuter D, Koczan D, Hakenberg OW, Thiesen HJ.

BJU Int. 2011 Jul;108(2 Pt 2):E29-35. doi: 10.1111/j.1464-410X.2010.09794.x. Epub 2011 Mar 16.

9.

Microarray-based gene expression analysis of an animal model for closed head injury.

Colak T, Cine N, Bamac B, Kurtas O, Ozbek A, Bicer U, Sunnetci D, Savlı H.

Injury. 2012 Aug;43(8):1264-70. doi: 10.1016/j.injury.2012.01.021. Epub 2012 Feb 16.

PMID:
22341557
10.

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

Sásik R, Calvo E, Corbeil J.

Bioinformatics. 2002 Dec;18(12):1633-40.

PMID:
12490448
11.

Microarray platform consistency is revealed by biologically functional analysis of gene expression profiles.

Li Z, Su Z, Wen Z, Shi L, Chen T.

BMC Bioinformatics. 2009 Oct 8;10 Suppl 11:S12. doi: 10.1186/1471-2105-10-S11-S12.

12.
13.

Temporal gene expression analysis of monolayer cultured rat hepatocytes.

Baker TK, Carfagna MA, Gao H, Dow ER, Li Q, Searfoss GH, Ryan TP.

Chem Res Toxicol. 2001 Sep;14(9):1218-31.

PMID:
11559036
15.

Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.

Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA.

BMC Bioinformatics. 2007 Oct 25;8:412.

17.

Investigation of variation in gene expression profiling of human blood by extended principle component analysis.

Xu Q, Ni S, Wu F, Liu F, Ye X, Mougin B, Meng X, Du X.

PLoS One. 2011;6(10):e26905. doi: 10.1371/journal.pone.0026905. Epub 2011 Oct 27.

18.

Dynamics of short-term gene expression profiling in liver following thermal injury.

Yang Q, Orman MA, Berthiaume F, Ierapetritou MG, Androulakis IP.

J Surg Res. 2012 Aug;176(2):549-58. doi: 10.1016/j.jss.2011.09.052. Epub 2011 Oct 21.

19.

Transcriptomics as a tool for assessing the scalability of mammalian cell perfusion systems.

Jayapal KP, Goudar CT.

Adv Biochem Eng Biotechnol. 2014;139:227-43. doi: 10.1007/10_2013_239.

PMID:
23949697
20.

Melatonin or ramelteon therapy differentially affects hepatic gene expression profiles after haemorrhagic shock in rat--A microarray analysis.

Kleber A, Ruf CG, Wolf A, Fink T, Glas M, Wolf B, Volk T, Abend M, Mathes AM.

Exp Mol Pathol. 2015 Oct;99(2):189-97. doi: 10.1016/j.yexmp.2015.06.019. Epub 2015 Jun 25.

PMID:
26116814

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