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Items: 1 to 20 of 132

1.

Alu repeats increase local recombination rates.

Witherspoon DJ, Watkins WS, Zhang Y, Xing J, Tolpinrud WL, Hedges DJ, Batzer MA, Jorde LB.

BMC Genomics. 2009 Nov 16;10:530. doi: 10.1186/1471-2164-10-530.

2.

Alu-associated enhancement of single nucleotide polymorphisms in the human genome.

Ng SK, Xue H.

Gene. 2006 Mar 1;368:110-6. Epub 2005 Dec 27.

PMID:
16380220
3.

The role of recombination in the origin and evolution of Alu subfamilies.

Teixeira-Silva A, Silva RM, Carneiro J, Amorim A, Azevedo L.

PLoS One. 2013 Jun 4;8(6):e64884. doi: 10.1371/journal.pone.0064884. Print 2013.

4.

Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity.

Carroll ML, Roy-Engel AM, Nguyen SV, Salem AH, Vogel E, Vincent B, Myers J, Ahmad Z, Nguyen L, Sammarco M, Watkins WS, Henke J, Makalowski W, Jorde LB, Deininger PL, Batzer MA.

J Mol Biol. 2001 Aug 3;311(1):17-40.

PMID:
11469855
5.

Superimposing polymorphism: the case of a point mutation within a polymorphic Alu insertion.

Martinez L, Reategui EP, Fonseca LR, Sierra-Montes JM, Terreros MC, Pereira-Simon S, Herrera RJ.

Hum Hered. 2005;59(2):109-17. Epub 2005 Apr 18.

PMID:
15838180
6.

Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations.

Witherspoon DJ, Zhang Y, Xing J, Watkins WS, Ha H, Batzer MA, Jorde LB.

Genome Res. 2013 Jul;23(7):1170-81. doi: 10.1101/gr.148973.112. Epub 2013 Apr 18.

7.

Alu repeat discovery and characterization within human genomes.

Hormozdiari F, Alkan C, Ventura M, Hajirasouliha I, Malig M, Hach F, Yorukoglu D, Dao P, Bakhshi M, Sahinalp SC, Eichler EE.

Genome Res. 2011 Jun;21(6):840-9. doi: 10.1101/gr.115956.110. Epub 2010 Dec 3.

8.

Phylogenetics of worldwide human populations as determined by polymorphic Alu insertions.

Antunez-de-Mayolo G, Antunez-de-Mayolo A, Antunez-de-Mayolo P, Papiha SS, Hammer M, Yunis JJ, Yunis EJ, Damodaran C, Martinez de Pancorbo M, Caeiro JL, Puzyrev VP, Herrera RJ.

Electrophoresis. 2002 Sep;23(19):3346-56.

PMID:
12373762
9.

Recently integrated Alu elements and human genomic diversity.

Salem AH, Kilroy GE, Watkins WS, Jorde LB, Batzer MA.

Mol Biol Evol. 2003 Aug;20(8):1349-61. Epub 2003 May 30.

PMID:
12777511
10.

The contribution of alu elements to mutagenic DNA double-strand break repair.

Morales ME, White TB, Streva VA, DeFreece CB, Hedges DJ, Deininger PL.

PLoS Genet. 2015 Mar 11;11(3):e1005016. doi: 10.1371/journal.pgen.1005016. eCollection 2015 Mar.

11.

Non-traditional Alu evolution and primate genomic diversity.

Roy-Engel AM, Carroll ML, El-Sawy M, Salem AH, Garber RK, Nguyen SV, Deininger PL, Batzer MA.

J Mol Biol. 2002 Mar 8;316(5):1033-40.

PMID:
11884141
12.

AluY insertion (IVS4-52ins316alu) in the glycerol kinase gene from an individual with benign glycerol kinase deficiency.

Zhang Y, Dipple KM, Vilain E, Huang BL, Finlayson G, Therrell BL, Worley K, Deininger P, McCabe ER.

Hum Mutat. 2000;15(4):316-23.

PMID:
10737976
13.

Alu repeats and human genomic diversity.

Batzer MA, Deininger PL.

Nat Rev Genet. 2002 May;3(5):370-9. Review.

PMID:
11988762
14.

Differential alu mobilization and polymorphism among the human and chimpanzee lineages.

Hedges DJ, Callinan PA, Cordaux R, Xing J, Barnes E, Batzer MA.

Genome Res. 2004 Jun;14(6):1068-75.

15.

Identification of human-specific AluS elements through comparative genomics.

Lee J, Kim YJ, Mun S, Kim HS, Han K.

Gene. 2015 Jan 25;555(2):208-16. doi: 10.1016/j.gene.2014.11.005. Epub 2014 Nov 7.

PMID:
25447892
16.

Shuffling of genes within low-copy repeats on 22q11 (LCR22) by Alu-mediated recombination events during evolution.

Babcock M, Pavlicek A, Spiteri E, Kashork CD, Ioshikhes I, Shaffer LG, Jurka J, Morrow BE.

Genome Res. 2003 Dec;13(12):2519-32.

17.

Alu repeats and human disease.

Deininger PL, Batzer MA.

Mol Genet Metab. 1999 Jul;67(3):183-93. Review.

PMID:
10381326
18.

Sequence Analysis and Characterization of Active Human Alu Subfamilies Based on the 1000 Genomes Pilot Project.

Konkel MK, Walker JA, Hotard AB, Ranck MC, Fontenot CC, Storer J, Stewart C, Marth GT; 1000 Genomes Consortium, Batzer MA.

Genome Biol Evol. 2015 Aug 29;7(9):2608-22. doi: 10.1093/gbe/evv167.

19.

Male-driven biased gene conversion governs the evolution of base composition in human alu repeats.

Webster MT, Smith NG, Hultin-Rosenberg L, Arndt PF, Ellegren H.

Mol Biol Evol. 2005 Jun;22(6):1468-74. Epub 2005 Mar 16.

PMID:
15772377
20.

African origin of human-specific polymorphic Alu insertions.

Batzer MA, Stoneking M, Alegria-Hartman M, Bazan H, Kass DH, Shaikh TH, Novick GE, Ioannou PA, Scheer WD, Herrera RJ, et al.

Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):12288-92.

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