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Items: 1 to 20 of 134

1.

Googling DNA sequences on the World Wide Web.

Hajibabaei M, Singer GA.

BMC Bioinformatics. 2009 Nov 10;10 Suppl 14:S4. doi: 10.1186/1471-2105-10-S14-S4.

2.

iBarcode.org: web-based molecular biodiversity analysis.

Singer GA, Hajibabaei M.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S14. doi: 10.1186/1471-2105-10-S6-S14.

3.

The DNA Barcode Linker.

Albu M, Nikbakht H, Hajibabaei M, Hickey DA.

Mol Ecol Resour. 2011 Jan;11(1):84-8. doi: 10.1111/j.1755-0998.2010.02901.x. Epub 2010 Aug 15.

PMID:
21429103
4.

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.

Pattyn F, Hoebeeck J, Robbrecht P, Michels E, De Paepe A, Bottu G, Coornaert D, Herzog R, Speleman F, Vandesompele J.

BMC Bioinformatics. 2006 Nov 9;7:496.

5.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

6.
7.

BOV--a web-based BLAST output visualization tool.

Gollapudi R, Revanna KV, Hemmerich C, Schaack S, Dong Q.

BMC Genomics. 2008 Sep 15;9:414. doi: 10.1186/1471-2164-9-414.

8.
9.

RExPrimer: an integrated primer designing tool increases PCR effectiveness by avoiding 3' SNP-in-primer and mis-priming from structural variation.

Piriyapongsa J, Ngamphiw C, Assawamakin A, Wangkumhang P, Suwannasri P, Ruangrit U, Agavatpanitch G, Tongsima S.

BMC Genomics. 2009 Dec 3;10 Suppl 3:S4. doi: 10.1186/1471-2164-10-S3-S4.

10.

BioXSD: the common data-exchange format for everyday bioinformatics web services.

Kalas M, Puntervoll P, Joseph A, Bartaseviciūte E, Töpfer A, Venkataraman P, Pettifer S, Bryne JC, Ison J, Blanchet C, Rapacki K, Jonassen I.

Bioinformatics. 2010 Sep 15;26(18):i540-6. doi: 10.1093/bioinformatics/btq391.

11.

GEM-TREND: a web tool for gene expression data mining toward relevant network discovery.

Feng C, Araki M, Kunimoto R, Tamon A, Makiguchi H, Niijima S, Tsujimoto G, Okuno Y.

BMC Genomics. 2009 Sep 3;10:411. doi: 10.1186/1471-2164-10-411.

12.

TRFMA: a web-based tool for terminal restriction fragment length polymorphism analysis based on molecular weight.

Nakano Y, Takeshita T, Yamashita Y.

Bioinformatics. 2006 Jul 15;22(14):1788-9. Epub 2006 May 18.

PMID:
16709590
13.

Intelligent client for integrating bioinformatics services.

Navas-Delgado I, Rojano-Muñoz Mdel M, Ramírez S, Pérez AJ, Andrés León E, Aldana-Montes JF, Trelles O.

Bioinformatics. 2006 Jan 1;22(1):106-11. Epub 2005 Oct 27.

PMID:
16257987
14.

SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read.

Falgueras J, Lara AJ, Fernández-Pozo N, Cantón FR, Pérez-Trabado G, Claros MG.

BMC Bioinformatics. 2010 Jan 20;11:38. doi: 10.1186/1471-2105-11-38.

15.

ESTuber db: an online database for Tuber borchii EST sequences.

Lazzari B, Caprera A, Cosentino C, Stella A, Milanesi L, Viotti A.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S13.

16.

Query Chem: a Google-powered web search combining text and chemical structures.

Klekota J, Roth FP, Schreiber SL.

Bioinformatics. 2006 Jul 1;22(13):1670-3. Epub 2006 May 3.

PMID:
16672261
17.

AutoGRAPH: an interactive web server for automating and visualizing comparative genome maps.

Derrien T, André C, Galibert F, Hitte C.

Bioinformatics. 2007 Feb 15;23(4):498-9. Epub 2006 Dec 4.

PMID:
17145741
18.

ESTPiper--a web-based analysis pipeline for expressed sequence tags.

Tang Z, Choi JH, Hemmerich C, Sarangi A, Colbourne JK, Dong Q.

BMC Genomics. 2009 Apr 21;10:174. doi: 10.1186/1471-2164-10-174.

19.

ASAP: automated sequence annotation pipeline for web-based updating of sequence information with a local dynamic database.

Kossenkov A, Manion FJ, Korotkov E, Moloshok TD, Ochs MF.

Bioinformatics. 2003 Mar 22;19(5):675-6.

PMID:
12651736
20.

PatMaN: rapid alignment of short sequences to large databases.

Prüfer K, Stenzel U, Dannemann M, Green RE, Lachmann M, Kelso J.

Bioinformatics. 2008 Jul 1;24(13):1530-1. doi: 10.1093/bioinformatics/btn223. Epub 2008 May 8.

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