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Toward the use of genomics to study microevolutionary change in bacteria.

Falush D.

PLoS Genet. 2009 Oct;5(10):e1000627. doi: 10.1371/journal.pgen.1000627. Epub 2009 Oct 26. Review.


Comparative genomics identifies the genetic islands that distinguish Neisseria meningitidis, the agent of cerebrospinal meningitis, from other Neisseria species.

Perrin A, Bonacorsi S, Carbonnelle E, Talibi D, Dessen P, Nassif X, Tinsley C.

Infect Immun. 2002 Dec;70(12):7063-72.


Living in a changing environment: insights into host adaptation in Neisseria meningitidis from comparative genomics.

Schoen C, Joseph B, Claus H, Vogel U, Frosch M.

Int J Med Microbiol. 2007 Nov;297(7-8):601-13. Epub 2007 Jun 14. Review.


Whole-genome sequence of the transformable Neisseria meningitidis serogroup A strain WUE2594.

Schoen C, Weber-Lehmann J, Blom J, Joseph B, Goesmann A, Strittmatter A, Frosch M.

J Bacteriol. 2011 Apr;193(8):2064-5. doi: 10.1128/JB.00084-11. Epub 2011 Feb 4.


Pathogenesis of Campylobacter.

Poly F, Guerry P.

Curr Opin Gastroenterol. 2008 Jan;24(1):27-31. Review.


Genomic evidence for the emergence and evolution of pathogenicity and niche preferences in the genus Campylobacter.

Iraola G, Pérez R, Naya H, Paolicchi F, Pastor E, Valenzuela S, Calleros L, Velilla A, Hernández M, Morsella C.

Genome Biol Evol. 2014 Sep 4;6(9):2392-405. doi: 10.1093/gbe/evu195.


Evolution and comparative genomics of Campylobacter jejuni ST-677 clonal complex.

Kivistö RI, Kovanen S, Skarp-de Haan A, Schott T, Rahkio M, Rossi M, Hänninen ML.

Genome Biol Evol. 2014 Sep 4;6(9):2424-38. doi: 10.1093/gbe/evu194.


Microevolutionary genomics of bacteria.

Jordan IK, Rogozin IB, Wolf YI, Koonin EV.

Theor Popul Biol. 2002 Jun;61(4):435-47. Review.


Genomics of Neisseria meningitidis.

Nassif X.

Int J Med Microbiol. 2002 Feb;291(6-7):419-23. Review.


A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

Méric G, Yahara K, Mageiros L, Pascoe B, Maiden MC, Jolley KA, Sheppard SK.

PLoS One. 2014 Mar 27;9(3):e92798. doi: 10.1371/journal.pone.0092798. eCollection 2014.


A single nucleotide change in mutY increases the emergence of antibiotic-resistant Campylobacter jejuni mutants.

Dai L, Muraoka WT, Wu Z, Sahin O, Zhang Q.

J Antimicrob Chemother. 2015 Oct;70(10):2739-48. doi: 10.1093/jac/dkv190. Epub 2015 Jul 13.


Genomic perspectives on the evolution and spread of bacterial pathogens.

Bentley SD, Parkhill J.

Proc Biol Sci. 2015 Dec 22;282(1821):20150488. doi: 10.1098/rspb.2015.0488. Review.


Within-host evolution of bacterial pathogens.

Didelot X, Walker AS, Peto TE, Crook DW, Wilson DJ.

Nat Rev Microbiol. 2016 Mar;14(3):150-62. doi: 10.1038/nrmicro.2015.13. Epub 2016 Jan 19. Review.


[Functional evolution of bacteria in degradation of environmental pollutants].

Nojiri H, Tsuda M.

Tanpakushitsu Kakusan Koso. 2005 Oct;50(12):1505-9. Review. Japanese. No abstract available.


How the Knowledge of Interactions between Meningococcus and the Human Immune System Has Been Used to Prepare Effective Neisseria meningitidis Vaccines.

Gasparini R, Panatto D, Bragazzi NL, Lai PL, Bechini A, Levi M, Durando P, Amicizia D.

J Immunol Res. 2015;2015:189153. doi: 10.1155/2015/189153. Epub 2015 Aug 17. Review.


Emergence of a new epidemic Neisseria meningitidis serogroup A Clone in the African meningitis belt: high-resolution picture of genomic changes that mediate immune evasion.

Lamelas A, Harris SR, Röltgen K, Dangy JP, Hauser J, Kingsley RA, Connor TR, Sie A, Hodgson A, Dougan G, Parkhill J, Bentley SD, Pluschke G.

MBio. 2014 Oct 21;5(5):e01974-14. doi: 10.1128/mBio.01974-14.


Genome dynamics in major bacterial pathogens.

Ambur OH, Davidsen T, Frye SA, Balasingham SV, Lagesen K, Rognes T, Tønjum T.

FEMS Microbiol Rev. 2009 May;33(3):453-70. Review.


Inter- and intra-genomic heterogeneity of the intervening sequence in the 23S ribosomal RNA gene of Campylobacter jejuni and Campylobacter coli.

Meinersmann RJ, Phillips RW, Ladely SR.

Syst Appl Microbiol. 2009 Apr;32(2):91-100. doi: 10.1016/j.syapm.2008.12.004. Epub 2009 Feb 6.


Insights from genomics into bacterial pathogen populations.

Wilson DJ.

PLoS Pathog. 2012 Sep;8(9):e1002874. doi: 10.1371/journal.ppat.1002874. Epub 2012 Sep 6. Review.


From structure to function of bacterial chromosomes: Evolutionary perspectives and ideas for new experiments.

Lagomarsino MC, Espéli O, Junier I.

FEBS Lett. 2015 Oct 7;589(20 Pt A):2996-3004. doi: 10.1016/j.febslet.2015.07.002. Epub 2015 Jul 11. Review.

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