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Items: 1 to 20 of 138

1.

GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database.

Schriml LM, Arze C, Nadendla S, Ganapathy A, Felix V, Mahurkar A, Phillippy K, Gussman A, Angiuoli S, Ghedin E, White O, Hall N.

Nucleic Acids Res. 2010 Jan;38(Database issue):D754-64. doi: 10.1093/nar/gkp832. Epub 2009 Oct 22.

2.

GeneNotes--a novel information management software for biologists.

Hong P, Wong WH.

BMC Bioinformatics. 2005 Feb 1;6:20.

3.

Pathema: a clade-specific bioinformatics resource center for pathogen research.

Brinkac LM, Davidsen T, Beck E, Ganapathy A, Caler E, Dodson RJ, Durkin AS, Harkins DM, Lorenzi H, Madupu R, Sebastian Y, Shrivastava S, Thiagarajan M, Orvis J, Sundaram JP, Crabtree J, Galens K, Zhao Y, Inman JM, Montgomery R, Schobel S, Galinsky K, Tanenbaum DM, Resnick A, Zafar N, White O, Sutton G.

Nucleic Acids Res. 2010 Jan;38(Database issue):D408-14. doi: 10.1093/nar/gkp850. Epub 2009 Oct 20.

4.

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata.

Liolios K, Chen IM, Mavromatis K, Tavernarakis N, Hugenholtz P, Markowitz VM, Kyrpides NC.

Nucleic Acids Res. 2010 Jan;38(Database issue):D346-54. doi: 10.1093/nar/gkp848. Epub 2009 Nov 13.

5.
6.

H-InvDB in 2009: extended database and data mining resources for human genes and transcripts.

Yamasaki C, Murakami K, Takeda J, Sato Y, Noda A, Sakate R, Habara T, Nakaoka H, Todokoro F, Matsuya A, Imanishi T, Gojobori T.

Nucleic Acids Res. 2010 Jan;38(Database issue):D626-32. doi: 10.1093/nar/gkp1020. Epub 2009 Nov 23.

7.

MetaBasis: a web-based database containing metadata on software tools and databases in the field of bioinformatics.

Atlamazoglou V, Thireou T, Hamodrakas Y, Spyrou G.

Appl Bioinformatics. 2006;5(3):187-92.

PMID:
16922600
8.

Megx.net: integrated database resource for marine ecological genomics.

Kottmann R, Kostadinov I, Duhaime MB, Buttigieg PL, Yilmaz P, Hankeln W, Waldmann J, Glöckner FO.

Nucleic Acids Res. 2010 Jan;38(Database issue):D391-5. doi: 10.1093/nar/gkp918. Epub 2009 Oct 25.

9.

HPIDB--a unified resource for host-pathogen interactions.

Kumar R, Nanduri B.

BMC Bioinformatics. 2010 Oct 7;11 Suppl 6:S16. doi: 10.1186/1471-2105-11-S6-S16.

10.

miRGen 2.0: a database of microRNA genomic information and regulation.

Alexiou P, Vergoulis T, Gleditzsch M, Prekas G, Dalamagas T, Megraw M, Grosse I, Sellis T, Hatzigeorgiou AG.

Nucleic Acids Res. 2010 Jan;38(Database issue):D137-41. doi: 10.1093/nar/gkp888. Epub 2009 Oct 22.

11.

PMRD: plant microRNA database.

Zhang Z, Yu J, Li D, Zhang Z, Liu F, Zhou X, Wang T, Ling Y, Su Z.

Nucleic Acids Res. 2010 Jan;38(Database issue):D806-13. doi: 10.1093/nar/gkp818. Epub 2009 Oct 6.

12.

The Mouse Genome Database: enhancements and updates.

Bult CJ, Kadin JA, Richardson JE, Blake JA, Eppig JT; Mouse Genome Database Group.

Nucleic Acids Res. 2010 Jan;38(Database issue):D586-92. doi: 10.1093/nar/gkp880. Epub 2009 Oct 27.

13.

GWIDD: Genome-wide protein docking database.

Kundrotas PJ, Zhu Z, Vakser IA.

Nucleic Acids Res. 2010 Jan;38(Database issue):D513-7. doi: 10.1093/nar/gkp944. Epub 2009 Nov 9.

14.
15.

New tools at the Candida Genome Database: biochemical pathways and full-text literature search.

Skrzypek MS, Arnaud MB, Costanzo MC, Inglis DO, Shah P, Binkley G, Miyasato SR, Sherlock G.

Nucleic Acids Res. 2010 Jan;38(Database issue):D428-32. doi: 10.1093/nar/gkp836. Epub 2009 Oct 6.

16.

Developing a modern web interface for database-driven bioinformatics tools.

Khandheria P, Garner HR.

IEEE Eng Med Biol Mag. 2007 Mar-Apr;26(2):96-8. No abstract available.

PMID:
17441614
17.

FlyTED: the Drosophila Testis Gene Expression Database.

Zhao J, Klyne G, Benson E, Gudmannsdottir E, White-Cooper H, Shotton D.

Nucleic Acids Res. 2010 Jan;38(Database issue):D710-5. doi: 10.1093/nar/gkp1006. Epub 2009 Nov 24.

18.

FunSimMat update: new features for exploring functional similarity.

Schlicker A, Albrecht M.

Nucleic Acids Res. 2010 Jan;38(Database issue):D244-8. doi: 10.1093/nar/gkp979. Epub 2009 Nov 18.

19.

NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure.

Turner DH, Mathews DH.

Nucleic Acids Res. 2010 Jan;38(Database issue):D280-2. doi: 10.1093/nar/gkp892. Epub 2009 Oct 30.

20.

GeneCruiser: a web service for the annotation of microarray data.

Liefeld T, Reich M, Gould J, Zhang P, Tamayo P, Mesirov JP.

Bioinformatics. 2005 Sep 15;21(18):3681-2. Epub 2005 Jul 19.

PMID:
16030072

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