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Items: 1 to 20 of 58

1.

Prediction of plant miRNA genes.

Jones-Rhoades MW.

Methods Mol Biol. 2010;592:19-30. doi: 10.1007/978-1-60327-005-2_2.

PMID:
19802586
2.

Computational identification of novel microRNAs and targets in Brassica napus.

Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM.

FEBS Lett. 2007 Apr 3;581(7):1464-74. Epub 2007 Mar 8.

3.

miRNA Target Prediction in Plants.

Fahlgren N, Carrington JC.

Methods Mol Biol. 2010;592:51-7. doi: 10.1007/978-1-60327-005-2_4.

PMID:
19802588
4.

Computational prediction of amphioxus microRNA genes and their targets.

Luo Y, Zhang S.

Gene. 2009 Jan 1;428(1-2):41-6. doi: 10.1016/j.gene.2008.09.022. Epub 2008 Oct 1.

PMID:
18930793
5.
6.

Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa.

Li Y, Li W, Jin YX.

Acta Biochim Biophys Sin (Shanghai). 2005 Feb;37(2):75-87.

PMID:
15685364
7.

Conservation and divergence of microRNAs in Populus.

Barakat A, Wall PK, Diloreto S, Depamphilis CW, Carlson JE.

BMC Genomics. 2007 Dec 31;8:481. doi: 10.1186/1471-2164-8-481.

8.

Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula.

Zhou ZS, Huang SQ, Yang ZM.

Biochem Biophys Res Commun. 2008 Sep 26;374(3):538-42. doi: 10.1016/j.bbrc.2008.07.083. Epub 2008 Jul 26.

PMID:
18662674
9.

Functional genomic, computational and proteomic analysis of C. elegans microRNAs.

Lehrbach NJ, Miska EA.

Brief Funct Genomic Proteomic. 2008 May;7(3):228-35. doi: 10.1093/bfgp/eln024. Epub 2008 Jun 19. Review.

PMID:
18565984
10.

Computational identification of microRNAs and their targets in Gossypium hirsutum expressed sequence tags.

Qiu CX, Xie FL, Zhu YY, Guo K, Huang SQ, Nie L, Yang ZM.

Gene. 2007 Jun 15;395(1-2):49-61. Epub 2007 Mar 7.

PMID:
17408884
11.

miRNomics-The bioinformatics of microRNA genes.

Ghosh Z, Chakrabarti J, Mallick B.

Biochem Biophys Res Commun. 2007 Nov 9;363(1):6-11. Epub 2007 Aug 13. Review.

PMID:
17714687
12.

CID-miRNA: a web server for prediction of novel miRNA precursors in human genome.

Tyagi S, Vaz C, Gupta V, Bhatia R, Maheshwari S, Srinivasan A, Bhattacharya A.

Biochem Biophys Res Commun. 2008 Aug 8;372(4):831-4. doi: 10.1016/j.bbrc.2008.05.134. Epub 2008 Jun 2.

PMID:
18522801
13.

miROrtho: computational survey of microRNA genes.

Gerlach D, Kriventseva EV, Rahman N, Vejnar CE, Zdobnov EM.

Nucleic Acids Res. 2009 Jan;37(Database issue):D111-7. doi: 10.1093/nar/gkn707. Epub 2008 Oct 15.

14.

Identification of novel homologous microRNA genes in the rhesus macaque genome.

Yue J, Sheng Y, Orwig KE.

BMC Genomics. 2008 Jan 10;9:8. doi: 10.1186/1471-2164-9-8.

15.

Prediction and identification of herpes simplex virus 1-encoded microRNAs.

Cui C, Griffiths A, Li G, Silva LM, Kramer MF, Gaasterland T, Wang XJ, Coen DM.

J Virol. 2006 Jun;80(11):5499-508.

16.

A genome-wide map of conserved microRNA targets in C. elegans.

Lall S, Grün D, Krek A, Chen K, Wang YL, Dewey CN, Sood P, Colombo T, Bray N, Macmenamin P, Kao HL, Gunsalus KC, Pachter L, Piano F, Rajewsky N.

Curr Biol. 2006 Mar 7;16(5):460-71. Epub 2006 Feb 2.

17.

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

Lacombe S, Nagasaki H, Santi C, Duval D, Piégu B, Bangratz M, Breitler JC, Guiderdoni E, Brugidou C, Hirsch J, Cao X, Brice C, Panaud O, Karlowski WM, Sato Y, Echeverria M.

BMC Plant Biol. 2008 Dec 2;8:123. doi: 10.1186/1471-2229-8-123.

18.

Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum).

Yin Z, Li C, Han X, Shen F.

Gene. 2008 May 15;414(1-2):60-6. doi: 10.1016/j.gene.2008.02.007. Epub 2008 Feb 20.

PMID:
18387754
19.

Correlation of expression profiles between microRNAs and mRNA targets using NCI-60 data.

Wang YP, Li KB.

BMC Genomics. 2009 May 12;10:218. doi: 10.1186/1471-2164-10-218.

20.

Conservation and divergence of plant microRNA genes.

Zhang B, Pan X, Cannon CH, Cobb GP, Anderson TA.

Plant J. 2006 Apr;46(2):243-59.

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