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Items: 1 to 20 of 59

1.

Evaluation of a new high-dimensional miRNA profiling platform.

Cunningham JM, Oberg AL, Borralho PM, Kren BT, French AJ, Wang L, Bot BM, Morlan BW, Silverstein KA, Staggs R, Zeng Y, Lamblin AF, Hilker CA, Fan JB, Steer CJ, Thibodeau SN.

BMC Med Genomics. 2009 Aug 27;2:57. doi: 10.1186/1755-8794-2-57.

2.

Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis.

Chen Y, Gelfond JA, McManus LM, Shireman PK.

BMC Genomics. 2009 Aug 28;10:407. doi: 10.1186/1471-2164-10-407.

3.

Profiling of pre-micro RNAs and microRNAs using quantitative real-time PCR (qPCR) arrays.

Chugh P, Tamburro K, Dittmer DP.

J Vis Exp. 2010 Dec 3;(46). pii: 2210. doi: 10.3791/2210.

4.

Sequencing bias: comparison of different protocols of microRNA library construction.

Tian G, Yin X, Luo H, Xu X, Bolund L, Zhang X, Gan SQ, Li N.

BMC Biotechnol. 2010 Sep 6;10:64. doi: 10.1186/1472-6750-10-64. Erratum in: BMC Biotechnol. 2011;11:48. Gan, Shang-Quang [added]; Li, Ning [added].

5.

High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA.

Mestdagh P, Feys T, Bernard N, Guenther S, Chen C, Speleman F, Vandesompele J.

Nucleic Acids Res. 2008 Dec;36(21):e143. doi: 10.1093/nar/gkn725. Epub 2008 Oct 21.

6.

Quantitative miRNA expression analysis using fluidigm microfluidics dynamic arrays.

Jang JS, Simon VA, Feddersen RM, Rakhshan F, Schultz DA, Zschunke MA, Lingle WL, Kolbert CP, Jen J.

BMC Genomics. 2011 Mar 9;12:144. doi: 10.1186/1471-2164-12-144.

7.

A PCR-based platform for microRNA expression profiling studies.

Wang X.

RNA. 2009 Apr;15(4):716-23. doi: 10.1261/rna.1460509. Epub 2009 Feb 13.

8.

MicroRNA Expression in Formalin-fixed Paraffin-embedded Cancer Tissue: Identifying Reference MicroRNAs and Variability.

Boisen MK, Dehlendorff C, Linnemann D, Schultz NA, Jensen BV, Høgdall EV, Johansen JS.

BMC Cancer. 2015 Dec 29;15:1024. doi: 10.1186/s12885-015-2030-2.

9.

An optimized isolation and labeling platform for accurate microRNA expression profiling.

Shingara J, Keiger K, Shelton J, Laosinchai-Wolf W, Powers P, Conrad R, Brown D, Labourier E.

RNA. 2005 Sep;11(9):1461-70. Epub 2005 Jul 25.

10.

Consensus miRNA expression profiles derived from interplatform normalization of microarray data.

Bargaje R, Hariharan M, Scaria V, Pillai B.

RNA. 2010 Jan;16(1):16-25. doi: 10.1261/rna.1688110. Epub 2009 Nov 30.

11.

Discovery of precursor and mature microRNAs and their putative gene targets using high-throughput sequencing in pineapple (Ananas comosus var. comosus).

Yusuf NH, Ong WD, Redwan RM, Latip MA, Kumar SV.

Gene. 2015 Oct 15;571(1):71-80. doi: 10.1016/j.gene.2015.06.050. Epub 2015 Jun 23.

PMID:
26115767
12.

Variability in microRNA recovery from plasma: Comparison of five commercial kits.

Brunet-Vega A, Pericay C, Quílez ME, Ramírez-Lázaro MJ, Calvet X, Lario S.

Anal Biochem. 2015 Nov 1;488:28-35. doi: 10.1016/j.ab.2015.07.018. Epub 2015 Aug 10.

PMID:
26271186
13.

A personalized microRNA microarray normalization method using a logistic regression model.

Wang B, Wang XF, Howell P, Qian X, Huang K, Riker AI, Ju J, Xi Y.

Bioinformatics. 2010 Jan 15;26(2):228-34. doi: 10.1093/bioinformatics/btp655. Epub 2009 Nov 23.

PMID:
19933824
14.

Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection.

Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ.

PLoS One. 2009 Jul 27;4(7):e6349. doi: 10.1371/journal.pone.0006349.

15.

Profiling microRNA expression in bovine alveolar macrophages using RNA-seq.

Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ.

Vet Immunol Immunopathol. 2013 Oct 1;155(4):238-44. doi: 10.1016/j.vetimm.2013.08.004. Epub 2013 Aug 24.

PMID:
24021155
16.

Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood.

Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A.

BMC Genomics. 2010 May 7;11:288. doi: 10.1186/1471-2164-11-288.

17.

miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression.

Wang WC, Lin FM, Chang WC, Lin KY, Huang HD, Lin NS.

BMC Bioinformatics. 2009 Oct 12;10:328. doi: 10.1186/1471-2105-10-328.

18.

Circulating microRNA profiling in patients with advanced non-squamous NSCLC receiving bevacizumab/erlotinib followed by platinum-based chemotherapy at progression (SAKK 19/05).

Joerger M, Baty F, Früh M, Droege C, Stahel RA, Betticher DC, von Moos R, Ochsenbein A, Pless M, Gautschi O, Rothschild S, Brauchli P, Klingbiel D, Zappa F, Brutsche M.

Lung Cancer. 2014 Aug;85(2):306-13. doi: 10.1016/j.lungcan.2014.04.014. Epub 2014 May 29.

PMID:
24928469
19.

3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer.

Asmann YW, Klee EW, Thompson EA, Perez EA, Middha S, Oberg AL, Therneau TM, Smith DI, Poland GA, Wieben ED, Kocher JP.

BMC Genomics. 2009 Nov 16;10:531. doi: 10.1186/1471-2164-10-531.

20.

Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression.

Patel OV, Suchyta SP, Sipkovsky SS, Yao J, Ireland JJ, Coussens PM, Smith GW.

Vet Immunol Immunopathol. 2005 May 15;105(3-4):331-42.

PMID:
15808310

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