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Items: 1 to 20 of 129

1.

Copy number variation influences gene expression and metabolic traits in mice.

Orozco LD, Cokus SJ, Ghazalpour A, Ingram-Drake L, Wang S, van Nas A, Che N, Araujo JA, Pellegrini M, Lusis AJ.

Hum Mol Genet. 2009 Nov 1;18(21):4118-29. doi: 10.1093/hmg/ddp360. Epub 2009 Jul 31.

2.

A high-resolution map of segmental DNA copy number variation in the mouse genome.

Graubert TA, Cahan P, Edwin D, Selzer RR, Richmond TA, Eis PS, Shannon WD, Li X, McLeod HL, Cheverud JM, Ley TJ.

PLoS Genet. 2007 Jan 5;3(1):e3. Epub 2006 Nov 22.

3.

The landscape of inherited and de novo copy number variants in a Plasmodium falciparum genetic cross.

Samarakoon U, Gonzales JM, Patel JJ, Tan A, Checkley L, Ferdig MT.

BMC Genomics. 2011 Sep 22;12:457. doi: 10.1186/1471-2164-12-457.

4.

Whole genome survey of copy number variation in the spontaneously hypertensive rat: relationship to quantitative trait loci, gene expression, and blood pressure.

Charchar FJ, Kaiser M, Bingham AJ, Fotinatos N, Ahmady F, Tomaszewski M, Samani NJ.

Hypertension. 2010 May;55(5):1231-8. doi: 10.1161/HYPERTENSIONAHA.109.141663. Epub 2010 Mar 15. Erratum in: Hypertension. 2010 Jun;55(6):e28.

5.

Recurrent DNA copy number variation in the laboratory mouse.

Egan CM, Sridhar S, Wigler M, Hall IM.

Nat Genet. 2007 Nov;39(11):1384-9. Epub 2007 Oct 28.

PMID:
17965714
6.

Expression quantitative trait loci: replication, tissue- and sex-specificity in mice.

van Nas A, Ingram-Drake L, Sinsheimer JS, Wang SS, Schadt EE, Drake T, Lusis AJ.

Genetics. 2010 Jul;185(3):1059-68. doi: 10.1534/genetics.110.116087. Epub 2010 May 3.

7.

Copy number variation of individual cattle genomes using next-generation sequencing.

Bickhart DM, Hou Y, Schroeder SG, Alkan C, Cardone MF, Matukumalli LK, Song J, Schnabel RD, Ventura M, Taylor JF, Garcia JF, Van Tassell CP, Sonstegard TS, Eichler EE, Liu GE.

Genome Res. 2012 Apr;22(4):778-90. doi: 10.1101/gr.133967.111. Epub 2012 Feb 2.

8.

A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits.

Chen C, Qiao R, Wei R, Guo Y, Ai H, Ma J, Ren J, Huang L.

BMC Genomics. 2012 Dec 27;13:733. doi: 10.1186/1471-2164-13-733.

9.

Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster.

Zhou J, Lemos B, Dopman EB, Hartl DL.

Genome Biol Evol. 2011;3:1014-24. doi: 10.1093/gbe/evr023.

10.

Copy number variation in Fayoumi and Leghorn chickens analyzed using array comparative genomic hybridization.

Abernathy J, Li X, Jia X, Chou W, Lamont SJ, Crooijmans R, Zhou H.

Anim Genet. 2014 Jun;45(3):400-11. doi: 10.1111/age.12141. Epub 2014 Mar 15.

PMID:
24628374
11.

Gene copy number variations in adaptive evolution: The genomic distribution of gene copy number variations revealed by genetic mapping and their adaptive role in an undomesticated species, white spruce (Picea glauca).

Prunier J, Caron S, Lamothe M, Blais S, Bousquet J, Isabel N, MacKay J.

Mol Ecol. 2017 Nov;26(21):5989-6001. doi: 10.1111/mec.14337. Epub 2017 Sep 15.

PMID:
28833771
12.

Significant gene content variation characterizes the genomes of inbred mouse strains.

Cutler G, Marshall LA, Chin N, Baribault H, Kassner PD.

Genome Res. 2007 Dec;17(12):1743-54. Epub 2007 Nov 7.

13.

High resolution mapping of expression QTLs in heterogeneous stock mice in multiple tissues.

Huang GJ, Shifman S, Valdar W, Johannesson M, Yalcin B, Taylor MS, Taylor JM, Mott R, Flint J.

Genome Res. 2009 Jun;19(6):1133-40. doi: 10.1101/gr.088120.108. Epub 2009 Apr 17.

14.

Genomic copy number and expression variation within the C57BL/6J inbred mouse strain.

Watkins-Chow DE, Pavan WJ.

Genome Res. 2008 Jan;18(1):60-6. Epub 2007 Nov 21.

15.

Cis-regulatory variations: a study of SNPs around genes showing cis-linkage in segregating mouse populations.

GuhaThakurta D, Xie T, Anand M, Edwards SW, Li G, Wang SS, Schadt EE.

BMC Genomics. 2006 Sep 15;7:235.

16.

Detection of copy number variations in rice using array-based comparative genomic hybridization.

Yu P, Wang C, Xu Q, Feng Y, Yuan X, Yu H, Wang Y, Tang S, Wei X.

BMC Genomics. 2011 Jul 20;12:372. doi: 10.1186/1471-2164-12-372.

17.

Two genes on A/J chromosome 18 are associated with susceptibility to Staphylococcus aureus infection by combined microarray and QTL analyses.

Ahn SH, Deshmukh H, Johnson N, Cowell LG, Rude TH, Scott WK, Nelson CL, Zaas AK, Marchuk DA, Keum S, Lamlertthon S, Sharma-Kuinkel BK, Sempowski GD, Fowler VG Jr.

PLoS Pathog. 2010 Sep 2;6(9):e1001088. doi: 10.1371/journal.ppat.1001088.

18.

Identification of pathways for atherosclerosis in mice: integration of quantitative trait locus analysis and global gene expression data.

Wang SS, Schadt EE, Wang H, Wang X, Ingram-Drake L, Shi W, Drake TA, Lusis AJ.

Circ Res. 2007 Aug 3;101(3):e11-30. Epub 2007 Jul 19.

19.

Discovery and refinement of muscle weight QTLs in B6 × D2 advanced intercross mice.

Carbonetto P, Cheng R, Gyekis JP, Parker CC, Blizard DA, Palmer AA, Lionikas A.

Physiol Genomics. 2014 Aug 15;46(16):571-82. doi: 10.1152/physiolgenomics.00055.2014. Epub 2014 Jun 24.

20.

Mapping segmental and sequence variations among laboratory mice using BAC array CGH.

Snijders AM, Nowak NJ, Huey B, Fridlyand J, Law S, Conroy J, Tokuyasu T, Demir K, Chiu R, Mao JH, Jain AN, Jones SJ, Balmain A, Pinkel D, Albertson DG.

Genome Res. 2005 Feb;15(2):302-11.

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