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Genome-wide analysis of histone methylation reveals chromatin state-based regulation of gene transcription and function of memory CD8+ T cells.

Araki Y, Wang Z, Zang C, Wood WH 3rd, Schones D, Cui K, Roh TY, Lhotsky B, Wersto RP, Peng W, Becker KG, Zhao K, Weng NP.

Immunity. 2009 Jun 19;30(6):912-25. doi: 10.1016/j.immuni.2009.05.006.


Histone acetylation at the single-cell level: a marker of memory CD8+ T cell differentiation and functionality.

Dispirito JR, Shen H.

J Immunol. 2010 May 1;184(9):4631-6. doi: 10.4049/jimmunol.0903830.


Histone acetylation is associated with differential gene expression in the rapid and robust memory CD8(+) T-cell response.

Fann M, Godlove JM, Catalfamo M, Wood WH 3rd, Chrest FJ, Chun N, Granger L, Wersto R, Madara K, Becker K, Henkart PA, Weng NP.

Blood. 2006 Nov 15;108(10):3363-70.


Coupling of T cell receptor specificity to natural killer T cell development by bivalent histone H3 methylation.

Dobenecker MW, Kim JK, Marcello J, Fang TC, Prinjha R, Bosselut R, Tarakhovsky A.

J Exp Med. 2015 Mar 9;212(3):297-306. doi: 10.1084/jem.20141499.


Genome-Wide Studies Reveal that H3K4me3 Modification in Bivalent Genes Is Dynamically Regulated during the Pluripotent Cell Cycle and Stabilized upon Differentiation.

Grandy RA, Whitfield TW, Wu H, Fitzgerald MP, VanOudenhove JJ, Zaidi SK, Montecino MA, Lian JB, van Wijnen AJ, Stein JL, Stein GS.

Mol Cell Biol. 2015 Dec 7;36(4):615-27. doi: 10.1128/MCB.00877-15.


Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.

Lindeman LC, Winata CL, Aanes H, Mathavan S, Alestrom P, Collas P.

Int J Dev Biol. 2010;54(5):803-13. doi: 10.1387/ijdb.103081ll.


Maturation-related histone modifications in the PU.1 promoter regulate Th9-cell development.

Ramming A, Druzd D, Leipe J, Schulze-Koops H, Skapenko A.

Blood. 2012 May 17;119(20):4665-74. doi: 10.1182/blood-2011-11-392589.


Histone methylation mediates plasticity of human FOXP3(+) regulatory T cells by modulating signature gene expressions.

He H, Ni B, Tian Y, Tian Z, Chen Y, Liu Z, Yang X, Lv Y, Zhang Y.

Immunology. 2014 Mar;141(3):362-76. doi: 10.1111/imm.12198.


Rapid demethylation of the IFN-gamma gene occurs in memory but not naive CD8 T cells.

Kersh EN, Fitzpatrick DR, Murali-Krishna K, Shires J, Speck SH, Boss JM, Ahmed R.

J Immunol. 2006 Apr 1;176(7):4083-93.


Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana.

van Dijk K, Ding Y, Malkaram S, Riethoven JJ, Liu R, Yang J, Laczko P, Chen H, Xia Y, Ladunga I, Avramova Z, Fromm M.

BMC Plant Biol. 2010 Nov 5;10:238. doi: 10.1186/1471-2229-10-238.


Distinct epigenetic signatures delineate transcriptional programs during virus-specific CD8(+) T cell differentiation.

Russ BE, Olshanksy M, Smallwood HS, Li J, Denton AE, Prier JE, Stock AT, Croom HA, Cullen JG, Nguyen ML, Rowe S, Olson MR, Finkelstein DB, Kelso A, Thomas PG, Speed TP, Rao S, Turner SJ.

Immunity. 2014 Nov 20;41(5):853-65. doi: 10.1016/j.immuni.2014.11.001. Erratum in: Immunity. 2014 Dec 18;41(6):1064.


H3K27me3 and H3K4me3 chromatin environment at super-induced dehydration stress memory genes of Arabidopsis thaliana.

Liu N, Fromm M, Avramova Z.

Mol Plant. 2014 Mar;7(3):502-13. doi: 10.1093/mp/ssu001.


Epigenetic profiling in CD4+ and CD8+ T cells from Graves' disease patients reveals changes in genes associated with T cell receptor signaling.

Limbach M, Saare M, Tserel L, Kisand K, Eglit T, Sauer S, Axelsson T, Syvänen AC, Metspalu A, Milani L, Peterson P.

J Autoimmun. 2016 Feb;67:46-56. doi: 10.1016/j.jaut.2015.09.006.


Genome-wide mapping of histone H3 lysine 4 trimethylation in Eucalyptus grandis developing xylem.

Hussey SG, Mizrachi E, Groover A, Berger DK, Myburg AA.

BMC Plant Biol. 2015 May 10;15:117. doi: 10.1186/s12870-015-0499-0.


Gene regulation and chromatin remodeling by IL-12 and type I IFN in programming for CD8 T cell effector function and memory.

Agarwal P, Raghavan A, Nandiwada SL, Curtsinger JM, Bohjanen PR, Mueller DL, Mescher MF.

J Immunol. 2009 Aug 1;183(3):1695-704. doi: 10.4049/jimmunol.0900592.


Pre-TCR signaling and CD8 gene bivalent chromatin resolution during thymocyte development.

Harker N, Garefalaki A, Menzel U, Ktistaki E, Naito T, Georgopoulos K, Kioussis D.

J Immunol. 2011 Jun 1;186(11):6368-77. doi: 10.4049/jimmunol.1003567.


Broad shifts in gene expression during early postnatal life are associated with shifts in histone methylation patterns.

Lui JC, Chen W, Cheung CS, Baron J.

PLoS One. 2014 Jan 28;9(1):e86957. doi: 10.1371/journal.pone.0086957.

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