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Items: 1 to 20 of 122

1.

Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome.

Gordon JL, Byrne KP, Wolfe KH.

PLoS Genet. 2009 May;5(5):e1000485. doi: 10.1371/journal.pgen.1000485. Epub 2009 May 15.

2.

Evolution of gene order in the genomes of two related yeast species.

Fischer G, Neuvéglise C, Durrens P, Gaillardin C, Dujon B.

Genome Res. 2001 Dec;11(12):2009-19.

3.

The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.

Dietrich FS, Voegeli S, Brachat S, Lerch A, Gates K, Steiner S, Mohr C, Pöhlmann R, Luedi P, Choi S, Wing RA, Flavier A, Gaffney TD, Philippsen P.

Science. 2004 Apr 9;304(5668):304-7. Epub 2004 Mar 4.

4.

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae.

Kellis M, Birren BW, Lander ES.

Nature. 2004 Apr 8;428(6983):617-24. Epub 2004 Mar 7.

5.
6.

Yeast evolution and comparative genomics.

Liti G, Louis EJ.

Annu Rev Microbiol. 2005;59:135-53. Review.

PMID:
15877535
7.

Prevalence of small inversions in yeast gene order evolution.

Seoighe C, Federspiel N, Jones T, Hansen N, Bivolarovic V, Surzycki R, Tamse R, Komp C, Huizar L, Davis RW, Scherer S, Tait E, Shaw DJ, Harris D, Murphy L, Oliver K, Taylor K, Rajandream MA, Barrell BG, Wolfe KH.

Proc Natl Acad Sci U S A. 2000 Dec 19;97(26):14433-7.

8.

Extent of genomic rearrangement after genome duplication in yeast.

Seoighe C, Wolfe KH.

Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4447-52.

9.

Origin of the Yeast Whole-Genome Duplication.

Wolfe KH.

PLoS Biol. 2015 Aug 7;13(8):e1002221. doi: 10.1371/journal.pbio.1002221. eCollection 2015 Aug.

11.

Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae.

Dunham MJ, Badrane H, Ferea T, Adams J, Brown PO, Rosenzweig F, Botstein D.

Proc Natl Acad Sci U S A. 2002 Dec 10;99(25):16144-9. Epub 2002 Nov 21.

12.

Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains.

Pérez-Ortín JE, Querol A, Puig S, Barrio E.

Genome Res. 2002 Oct;12(10):1533-9.

13.

Genome sequence of the lager brewing yeast, an interspecies hybrid.

Nakao Y, Kanamori T, Itoh T, Kodama Y, Rainieri S, Nakamura N, Shimonaga T, Hattori M, Ashikari T.

DNA Res. 2009 Apr;16(2):115-29. doi: 10.1093/dnares/dsp003. Epub 2009 Mar 4.

14.

Evolutionary genomics of transposable elements in Saccharomyces cerevisiae.

Carr M, Bensasson D, Bergman CM.

PLoS One. 2012;7(11):e50978. doi: 10.1371/journal.pone.0050978. Epub 2012 Nov 30.

15.

Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus.

Vakirlis N, Sarilar V, Drillon G, Fleiss A, Agier N, Meyniel JP, Blanpain L, Carbone A, Devillers H, Dubois K, Gillet-Markowska A, Graziani S, Huu-Vang N, Poirel M, Reisser C, Schott J, Schacherer J, Lafontaine I, Llorente B, Neuvéglise C, Fischer G.

Genome Res. 2016 Jul;26(7):918-32. doi: 10.1101/gr.204420.116. Epub 2016 May 31.

16.

Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118.

Novo M, Bigey F, Beyne E, Galeote V, Gavory F, Mallet S, Cambon B, Legras JL, Wincker P, Casaregola S, Dequin S.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16333-8. doi: 10.1073/pnas.0904673106. Epub 2009 Sep 9.

17.

Whole-genome sequencing of sake yeast Saccharomyces cerevisiae Kyokai no. 7.

Akao T, Yashiro I, Hosoyama A, Kitagaki H, Horikawa H, Watanabe D, Akada R, Ando Y, Harashima S, Inoue T, Inoue Y, Kajiwara S, Kitamoto K, Kitamoto N, Kobayashi O, Kuhara S, Masubuchi T, Mizoguchi H, Nakao Y, Nakazato A, Namise M, Oba T, Ogata T, Ohta A, Sato M, Shibasaki S, Takatsume Y, Tanimoto S, Tsuboi H, Nishimura A, Yoda K, Ishikawa T, Iwashita K, Fujita N, Shimoi H.

DNA Res. 2011 Dec;18(6):423-34. doi: 10.1093/dnares/dsr029. Epub 2011 Sep 6.

18.

Yeast genome analysis identifies chromosomal translocation, gene conversion events and several sites of Ty element insertion.

Shibata Y, Malhotra A, Bekiranov S, Dutta A.

Nucleic Acids Res. 2009 Oct;37(19):6454-65. doi: 10.1093/nar/gkp650. Epub 2009 Aug 26.

19.

Identity and divergence of protein domain architectures after the yeast whole-genome duplication event.

Grassi L, Fusco D, Sellerio A, Corà D, Bassetti B, Caselle M, Lagomarsino MC.

Mol Biosyst. 2010 Nov;6(11):2305-15. doi: 10.1039/c003507f. Epub 2010 Aug 26.

PMID:
20820472
20.

Reorganization of adjacent gene relationships in yeast genomes by whole-genome duplication and gene deletion.

Byrnes JK, Morris GP, Li WH.

Mol Biol Evol. 2006 Jun;23(6):1136-43. Epub 2006 Mar 9.

PMID:
16527865

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