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Items: 1 to 20 of 74

1.

Relaxed selection and the evolution of RNA virus mucin-like pathogenicity factors.

Wertheim JO, Worobey M.

J Virol. 2009 May;83(9):4690-4. doi: 10.1128/JVI.02358-08. Epub 2009 Feb 18.

2.
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Evolution of mutational robustness in an RNA virus.

Montville R, Froissart R, Remold SK, Tenaillon O, Turner PE.

PLoS Biol. 2005 Nov;3(11):e381. Epub 2005 Nov 1.

4.

The extent of codon usage bias in human RNA viruses and its evolutionary origin.

Jenkins GM, Holmes EC.

Virus Res. 2003 Mar;92(1):1-7.

PMID:
12606071
5.

Composition bias and genome polarity of RNA viruses.

Auewarakul P.

Virus Res. 2005 Apr;109(1):33-7. Epub 2004 Nov 18.

PMID:
15826910
6.

Potential evolutionary influences on overlapping reading frames in the bovine leukemia virus pXBL region.

Zhao X, McGirr KM, Buehring GC.

Genomics. 2007 Apr;89(4):502-11. Epub 2007 Jan 18.

7.

Levels of selection in positive-strand virus dynamics.

Krakauer DC, Komarova NL.

J Evol Biol. 2003 Jan;16(1):64-73.

8.

Evolution of viral genomes: interplay between selection, recombination, and other forces.

Pond SL, Murrell B, Poon AF.

Methods Mol Biol. 2012;856:239-72. doi: 10.1007/978-1-61779-585-5_10. Review.

PMID:
22399462
9.

Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences.

Koonin EV, Dolja VV.

Crit Rev Biochem Mol Biol. 1993;28(5):375-430. Review. Erratum in: Crit Rev Biochem Mol Biol 1993;28(6):546.

PMID:
8269709
10.
11.

Recombination, selection and clock-like evolution of Rice yellow mottle virus.

Pinel-Galzi A, Mpunami A, Sangu E, Rakotomalala M, Traoré O, Sérémé D, Sorho F, Séré Y, Kanyeka Z, Konaté G, Fargette D.

Virology. 2009 Nov 10;394(1):164-72. doi: 10.1016/j.virol.2009.08.008. Epub 2009 Sep 9.

12.

Viruses in the RNA world.

Rima BK.

Biochem Soc Trans. 1996 Feb;24(1):1-13. Review. No abstract available.

PMID:
8674576
13.

Impact of RNA virus infection on plant cell function and evolution.

Niehl A, Heinlein M.

Ann N Y Acad Sci. 2009 Oct;1178:120-8. doi: 10.1111/j.1749-6632.2009.04996.x.

PMID:
19845632
14.
15.

Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution.

Pybus OG, Rambaut A, Belshaw R, Freckleton RP, Drummond AJ, Holmes EC.

Mol Biol Evol. 2007 Mar;24(3):845-52. Epub 2007 Jan 11.

PMID:
17218639
16.

A phylogenetic method for detecting positive epistasis in gene sequences and its application to RNA virus evolution.

Shapiro B, Rambaut A, Pybus OG, Holmes EC.

Mol Biol Evol. 2006 Sep;23(9):1724-30. Epub 2006 Jun 14.

PMID:
16774976
17.

Phylogenetic and evolutionary analyses of St. Louis encephalitis virus genomes.

Baillie GJ, Kolokotronis SO, Waltari E, Maffei JG, Kramer LD, Perkins SL.

Mol Phylogenet Evol. 2008 May;47(2):717-28. doi: 10.1016/j.ympev.2008.02.015. Epub 2008 Feb 29.

PMID:
18374605
18.

Phylogenetic relationships and molecular adaptation dynamics of human rhinoviruses.

Lewis-Rogers N, Bendall ML, Crandall KA.

Mol Biol Evol. 2009 May;26(5):969-81. doi: 10.1093/molbev/msp009. Epub 2009 Jan 30.

PMID:
19182223
19.

How RNA viruses maintain their genome integrity.

Barr JN, Fearns R.

J Gen Virol. 2010 Jun;91(Pt 6):1373-87. doi: 10.1099/vir.0.020818-0. Epub 2010 Mar 24. Review.

PMID:
20335491
20.

Codon bias and frequency-dependent selection on the hemagglutinin epitopes of influenza A virus.

Plotkin JB, Dushoff J.

Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7152-7. Epub 2003 May 14.

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