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Items: 1 to 20 of 80

1.
2.

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi.

Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W; Fungal Barcoding Consortium; Fungal Barcoding Consortium Author List.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6241-6. doi: 10.1073/pnas.1117018109. Epub 2012 Mar 27.

3.

Intra- and inter-isolate variation of ribosomal and protein-coding genes in Pleurotus: implications for molecular identification and phylogeny on fungal groups.

He XL, Li Q, Peng WH, Zhou J, Cao XL, Wang D, Huang ZQ, Tan W, Li Y, Gan BC.

BMC Microbiol. 2017 Jun 26;17(1):139. doi: 10.1186/s12866-017-1046-y.

4.

Phylogenetic species delimitation in ectomycorrhizal fungi and implications for barcoding: the case of the Tricholoma scalpturatum complex (Basidiomycota).

Jargeat P, Martos F, Carriconde F, Gryta H, Moreau PA, Gardes M.

Mol Ecol. 2010 Dec;19(23):5216-30. doi: 10.1111/j.1365-294X.2010.04863.x. Epub 2010 Nov 2.

PMID:
21044190
5.

Cryptic species revealed by molecular phylogenetic analysis of sequences obtained from basidiomata of Tulasnella.

Cruz D, Suárez JP, Kottke I, Piepenbring M.

Mycologia. 2014 Jul-Aug;106(4):708-22. doi: 10.3852/12-386. Epub 2014 May 29.

PMID:
24874921
6.

Differences in population size variability among populations and species of the family Salmonidae.

Dochtermann NA, Peacock MM.

J Anim Ecol. 2010 Jul;79(4):888-96. doi: 10.1111/j.1365-2656.2010.01686.x. Epub 2010 Apr 12.

PMID:
20412345
7.

Molecular differentiation of dermatophyte fungi.

Harmsen D, Schwinn A, Bröcker EB, Frosch M.

Mycoses. 1999 Apr;42(1-2):67-70.

PMID:
10394851
8.

Multi-locus species delimitation in closely related animals and fungi: one marker is not enough.

Dupuis JR, Roe AD, Sperling FA.

Mol Ecol. 2012 Sep;21(18):4422-36. doi: 10.1111/j.1365-294X.2012.05642.x. Epub 2012 Aug 14. Review.

PMID:
22891635
9.

Towards a unified paradigm for sequence-based identification of fungi.

Kõljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AF, Bahram M, Bates ST, Bruns TD, Bengtsson-Palme J, Callaghan TM, Douglas B, Drenkhan T, Eberhardt U, Dueñas M, Grebenc T, Griffith GW, Hartmann M, Kirk PM, Kohout P, Larsson E, Lindahl BD, Lücking R, Martín MP, Matheny PB, Nguyen NH, Niskanen T, Oja J, Peay KG, Peintner U, Peterson M, Põldmaa K, Saag L, Saar I, Schüßler A, Scott JA, Senés C, Smith ME, Suija A, Taylor DL, Telleria MT, Weiss M, Larsson KH.

Mol Ecol. 2013 Nov;22(21):5271-7. doi: 10.1111/mec.12481. Epub 2013 Sep 24.

PMID:
24112409
10.

Molecular operational taxonomic units as approximations of species in the light of evolutionary models and empirical data from Fungi.

Ryberg M.

Mol Ecol. 2015 Dec;24(23):5770-7. doi: 10.1111/mec.13444. Epub 2015 Nov 24.

PMID:
26523754
11.

Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota).

Ryberg M, Nilsson RH, Kristiansson E, Töpel M, Jacobsson S, Larsson E.

BMC Evol Biol. 2008 Feb 18;8:50. doi: 10.1186/1471-2148-8-50.

12.

Employing 454 amplicon pyrosequencing to reveal intragenomic divergence in the internal transcribed spacer rDNA region in fungi.

Lindner DL, Carlsen T, Henrik Nilsson R, Davey M, Schumacher T, Kauserud H.

Ecol Evol. 2013 Jun;3(6):1751-64. doi: 10.1002/ece3.586. Epub 2013 May 8.

13.

Phylogeny and systematics of 18 Colletotrichum species based on ribosomal DNA spacer sequences.

Sreenivasaprasad S, Mills PR, Meehan BM, Brown AE.

Genome. 1996 Jun;39(3):499-512.

PMID:
8674999
14.

Contrasting evolutionary patterns of 28S and ITS rRNA genes reveal high intragenomic variation in Cephalenchus (Nematoda): Implications for species delimitation.

Pereira TJ, Baldwin JG.

Mol Phylogenet Evol. 2016 May;98:244-60. doi: 10.1016/j.ympev.2016.02.016. Epub 2016 Feb 27.

15.

Thesis Abstract Morphological and phylogeographic analysis of Brazilian tortoises (Testudinidae).

Silva TL, Venancio LP, Bonini-Domingos CR.

Genet Mol Res. 2015 Dec 29;14(4):18604-6. doi: 10.4238/2015.December.28.8.

PMID:
26782509
16.

An open source chimera checker for the fungal ITS region.

Nilsson RH, Abarenkov K, Veldre V, Nylinder S, DE Wit P, Brosché S, Alfredsson JF, Ryberg M, Kristiansson E.

Mol Ecol Resour. 2010 Nov;10(6):1076-81. doi: 10.1111/j.1755-0998.2010.02850.x.

PMID:
21565119
17.

Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation.

Del-Prado R, Cubas P, Lumbsch HT, Divakar PK, Blanco O, de Paz GA, Molina MC, Crespo A.

Mol Phylogenet Evol. 2010 Jul;56(1):125-33. doi: 10.1016/j.ympev.2010.04.014. Epub 2010 Apr 23.

PMID:
20399873
18.

Phylogeographic inferences concerning evolution of Brazilian Passiflora actinia and P. elegans (Passifloraceae) based on ITS (nrDNA) variation.

Lorenz-Lemke AP, Muschner VC, Bonatto SL, Cervi AC, Salzano FM, Freitas LB.

Ann Bot. 2005 Apr;95(5):799-806. Epub 2005 Feb 14.

19.

An experimental study of intraspecific variation, developmental timing, and heterochrony in fishes.

Mabee PM, Olmstead KL, Cubbage CC.

Evolution. 2000 Dec;54(6):2091-106.

PMID:
11209785
20.

Genetic and phenotypic diversity of geographically different isolates of Glomus mosseae.

Avio L, Cristani C, Strani P, Giovannetti M.

Can J Microbiol. 2009 Mar;55(3):242-53. doi: 10.1139/w08-129.

PMID:
19370067

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