Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 123

1.

Rational stabilization of enzymes by computational redesign of surface charge-charge interactions.

Gribenko AV, Patel MM, Liu J, McCallum SA, Wang C, Makhatadze GI.

Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2601-6. doi: 10.1073/pnas.0808220106. Epub 2009 Feb 5.

2.

A computational approach for the rational design of stable proteins and enzymes: optimization of surface charge-charge interactions.

Schweiker KL, Makhatadze GI.

Methods Enzymol. 2009;454:175-211. doi: 10.1016/S0076-6879(08)03807-X.

PMID:
19216927
3.

Computational design of the Fyn SH3 domain with increased stability through optimization of surface charge charge interactions.

Schweiker KL, Zarrine-Afsar A, Davidson AR, Makhatadze GI.

Protein Sci. 2007 Dec;16(12):2694-702.

4.

Thermostabilization of Bacillus circulans xylanase via computational design of a flexible surface cavity.

Joo JC, Pohkrel S, Pack SP, Yoo YJ.

J Biotechnol. 2010 Mar;146(1-2):31-9. doi: 10.1016/j.jbiotec.2009.12.021. Epub 2010 Jan 13.

PMID:
20074594
5.

Pareto optimization in computational protein design with multiple objectives.

Suárez M, Tortosa P, Carrera J, Jaramillo A.

J Comput Chem. 2008 Dec;29(16):2704-11. doi: 10.1002/jcc.20981.

PMID:
18496793
6.

Rational engineering of enzyme stability.

Eijsink VG, Bjørk A, Gåseidnes S, Sirevåg R, Synstad B, van den Burg B, Vriend G.

J Biotechnol. 2004 Sep 30;113(1-3):105-20. Review.

PMID:
15380651
7.

Volsurf computational method applied to the prediction of stability of thermostable enzymes.

Braiuca P, Buthe A, Ebert C, Linda P, Gardossi L.

Biotechnol J. 2007 Feb;2(2):214-20.

PMID:
17203502
8.

Structural adaptation of the subunit interface of oligomeric thermophilic and hyperthermophilic enzymes.

Maugini E, Tronelli D, Bossa F, Pascarella S.

Comput Biol Chem. 2009 Apr;33(2):137-48. doi: 10.1016/j.compbiolchem.2008.08.003. Epub 2008 Aug 31.

PMID:
18845483
9.

Rational design of thermally stable proteins: relevance to bionanotechnology.

Renugopalakrishnan V, Garduño-Juárez R, Narasimhan G, Verma CS, Wei X, Li P.

J Nanosci Nanotechnol. 2005 Nov;5(11):1759-67. Review.

PMID:
16433409
10.

Functionally and structurally relevant residues of enzymes: are they segregated or overlapping?

Magyar C, Tüdos E, Simon I.

FEBS Lett. 2004 Jun 4;567(2-3):239-42.

11.

Tailoring new enzyme functions by rational redesign.

Cedrone F, Ménez A, Quéméneur E.

Curr Opin Struct Biol. 2000 Aug;10(4):405-10. Review.

PMID:
10981626
12.

Evolutionary relationship and application of a superfamily of cyclic amidohydrolase enzymes.

Nam SH, Park HS, Kim HS.

Chem Rec. 2005;5(5):298-307. Review.

PMID:
16211624
13.

Turning a mesophilic protein into a thermophilic one: a computational approach based on 3D structural features.

Basu S, Sen S.

J Chem Inf Model. 2009 Jul;49(7):1741-50. doi: 10.1021/ci900183m.

PMID:
19586011
14.

Incorporating receptor flexibility in the molecular design of protein interfaces.

Li L, Liang S, Pilcher MM, Meroueh SO.

Protein Eng Des Sel. 2009 Sep;22(9):575-86. doi: 10.1093/protein/gzp042. Epub 2009 Jul 30.

PMID:
19643976
15.

Computational tools for designing and engineering biocatalysts.

Damborsky J, Brezovsky J.

Curr Opin Chem Biol. 2009 Feb;13(1):26-34. doi: 10.1016/j.cbpa.2009.02.021. Epub 2009 Mar 16. Review.

PMID:
19297237
16.

Protein stabilization by the rational design of surface charge-charge interactions.

Schweiker KL, Makhatadze GI.

Methods Mol Biol. 2009;490:261-83. doi: 10.1007/978-1-59745-367-7_11.

PMID:
19157087
17.

Protein engineering to change thermal stability for food enzymes.

Goodenough PW, Jenkins JA.

Biochem Soc Trans. 1991 Aug;19(3):655-62. Review.

PMID:
1783192
18.

Engineering enzyme specificity.

Harris JL, Craik CS.

Curr Opin Chem Biol. 1998 Feb;2(1):127-32. Review.

PMID:
9667915
19.

Engineering the thermostability of a TIM-barrel enzyme by rational family shuffling.

Kamondi S, Szilágyi A, Barna L, Závodszky P.

Biochem Biophys Res Commun. 2008 Oct 3;374(4):725-30. doi: 10.1016/j.bbrc.2008.07.095. Epub 2008 Jul 27.

PMID:
18667161
20.

In silico design for protein stabilization.

Dahiyat BI.

Curr Opin Biotechnol. 1999 Aug;10(4):387-90. Review.

PMID:
10449321

Supplemental Content

Support Center