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Items: 1 to 20 of 149

1.

Following movement of the L1 stalk between three functional states in single ribosomes.

Cornish PV, Ermolenko DN, Staple DW, Hoang L, Hickerson RP, Noller HF, Ha T.

Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2571-6. doi: 10.1073/pnas.0813180106. Erratum in: Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5448.

2.

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation.

Fei J, Kosuri P, MacDougall DD, Gonzalez RL Jr.

Mol Cell. 2008 May 9;30(3):348-59. doi: 10.1016/j.molcel.2008.03.012.

3.

Spontaneous intersubunit rotation in single ribosomes.

Cornish PV, Ermolenko DN, Noller HF, Ha T.

Mol Cell. 2008 Jun 6;30(5):578-88. doi: 10.1016/j.molcel.2008.05.004.

4.

The role of L1 stalk-tRNA interaction in the ribosome elongation cycle.

Trabuco LG, Schreiner E, Eargle J, Cornish P, Ha T, Luthey-Schulten Z, Schulten K.

J Mol Biol. 2010 Oct 1;402(4):741-60. doi: 10.1016/j.jmb.2010.07.056.

5.

Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation.

Fei J, Bronson JE, Hofman JM, Srinivas RL, Wiggins CH, Gonzalez RL Jr.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15702-7. doi: 10.1073/pnas.0908077106.

6.
7.

Initiation factor 2 stabilizes the ribosome in a semirotated conformation.

Ling C, Ermolenko DN.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):15874-9. doi: 10.1073/pnas.1520337112.

8.

Energy barriers and driving forces in tRNA translocation through the ribosome.

Bock LV, Blau C, Schröder GF, Davydov II, Fischer N, Stark H, Rodnina MV, Vaiana AC, Grubmüller H.

Nat Struct Mol Biol. 2013 Dec;20(12):1390-6. doi: 10.1038/nsmb.2690.

PMID:
24186064
9.

A frameshifting stimulatory stem loop destabilizes the hybrid state and impedes ribosomal translocation.

Kim HK, Liu F, Fei J, Bustamante C, Gonzalez RL Jr, Tinoco I Jr.

Proc Natl Acad Sci U S A. 2014 Apr 15;111(15):5538-43. doi: 10.1073/pnas.1403457111.

10.

Structure of ratcheted ribosomes with tRNAs in hybrid states.

Julián P, Konevega AL, Scheres SH, Lázaro M, Gil D, Wintermeyer W, Rodnina MV, Valle M.

Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):16924-7. doi: 10.1073/pnas.0809587105.

11.

Locking and unlocking of ribosomal motions.

Valle M, Zavialov A, Sengupta J, Rawat U, Ehrenberg M, Frank J.

Cell. 2003 Jul 11;114(1):123-34.

12.

Following movement of domain IV of elongation factor G during ribosomal translocation.

Salsi E, Farah E, Dann J, Ermolenko DN.

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15060-5. doi: 10.1073/pnas.1410873111.

13.

Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome.

Svidritskiy E, Ling C, Ermolenko DN, Korostelev AA.

Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12283-8. doi: 10.1073/pnas.1304922110.

14.

Allosteric vs. spontaneous exit-site (E-site) tRNA dissociation early in protein synthesis.

Chen C, Stevens B, Kaur J, Smilansky Z, Cooperman BS, Goldman YE.

Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):16980-5. doi: 10.1073/pnas.1106999108.

15.

Spontaneous reverse movement of mRNA-bound tRNA through the ribosome.

Konevega AL, Fischer N, Semenkov YP, Stark H, Wintermeyer W, Rodnina MV.

Nat Struct Mol Biol. 2007 Apr;14(4):318-24.

PMID:
17369838
16.
17.

Structure and dynamics of the mammalian ribosomal pretranslocation complex.

Budkevich T, Giesebrecht J, Altman RB, Munro JB, Mielke T, Nierhaus KH, Blanchard SC, Spahn CM.

Mol Cell. 2011 Oct 21;44(2):214-24. doi: 10.1016/j.molcel.2011.07.040.

18.
19.

Conserved element of the dicistrovirus IGR IRES that mimics an E-site tRNA/ribosome interaction mediates multiple functions.

Jang CJ, Lo MC, Jan E.

J Mol Biol. 2009 Mar 20;387(1):42-58. doi: 10.1016/j.jmb.2009.01.042.

PMID:
19361441
20.

[Decoding errors--function of the ribosomal E site].

Bakowska-Zywicka K, Sikora M, Twardowski T.

Postepy Biochem. 2008;54(4):354-61. Review. Polish.

PMID:
19248581
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