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19118606,17470437,16612539,18590946,11734893,10772856,17976929,15363859,16344113,15356275,18629669,18643967,17988807,17628355,15548748,16093696,12949131,12679554,12885966,15087131,16093656,18844781,18621583,15297600,18068947,11710532,16797019,15020810,11343131,10901176,7752242,23981965,18842133,19166919,16093701,15955314,16915928,7932738,15014157,12832632,12722183,17382490,22543188,15593278,16330660,16445914,17623809,19224649,18394826,19845640,15890192,17126948,8014993,15944087,11001312,21512106,20513631,20100942,15254255,15020798,18796327,19420048,16015599,16517098,15749054,20215725,28857316,24013105,11523003,12679538,18557973,7473754,19362135,17899810,12138785,16147891,15777739,22691070,19563867,21462315,15995347,18662221,26872770,10486979,15777633,21908723,10655034,17052864,18343891,9719639,12384304,26123917,16368202,17028971,17049188,8602849,29850801,14739248,19473321,16717141,30836364,21207831,17077154,9621510,11988759,15045482,16625209,16523694,12111555,18629670,11070056,16339378,17694394,15944437,16093694,23908136,33789582,21156198,17623783,23676707,16356661,11441184,16288912,17034960,16093705,9262399,17202866,31610059,16818439,30626674,16245022,12654932,16093659,17884827,16134118,17056208,15542097,20399257,20228153,11343130,15936216,11557792,19747963,17000640,18525236,22918960,14871947,19442632,28903462,21756057,16522357,25503085,15313610,33105659,17034961,11719581,31717545,17922573,17435252,22759815,8288235,15012967,19198779,22617294,11827951,17150974,11756672,12419252,10486981,12226707,22242120,26895055,23855320,10368954,20426875,11707777,12213770,22688946,15891910,10077603,18356935,15983875,22465530,16033989,27714457,17174483,19563868,14871610,15194190,20877004,16733535,17490832,9597778,16508704,11908667,17326385,10673143,22408437,24038780,18088314,15473908,15616140,14963102,16015595,26104698,28505260,18929670,17152059,15107856,16093663,21798200,11107177,9440268,12461650,27736869,10474901,10952205,7815928,15930154,24055723,11309663,16356664,16014872,15777729,25633377,17495012,27706589,26739168,26895043,8498711,36449167,17178164,16033429,10343648,25653076,17433864,11773970,12612834,16871777,28062442,21976282,9729877,15197730,15981565,25577199,25056159,18436398,17351817,18664134,17345672,17161440,15737586,17381843,16093707,22548357,16651189,19899627,15922829,18976482,17934208,21846743,25428895,15508704,22077994,15616142,18612245,18092752,27914481,10692009,16093690,17023124,15676278,17436038,15508705,15221784,12572609,26916108,9071012,18192697,33017388,21429109,10490717,26676716,19904483,17424906,12574865,15588994,19077187,16093703,21232509,22180036,9430649,18353101,25637222,26987730,19390602,10570995,29360978,19140317,10889217,19914361,12773759,12569422,29325122,22547343,12408960,21127169,15993034,17511669,22201808,19738382,33592095,16183215,15965027,16182151,21916613,17166673,17935149,32056333,21352903,11368901,18046749,19349283,19453446,11004517,20977507,17008031,22559330,16442657,34999963,7479950,20958807,19289598,12436242,21184097,11465037,7870595,16701320,21881562,17459613,18612240,20350581,19463167,15969349,10233986,8119576,19765592,17181718,9792174,15896203,18670134,16297064,18237280,34270728,22405943,17673700,32271875,10862003,17962053,18031956,19560526,18724056,11404340,12355209,26996788,19416360,26992416,25388110,18836842,15780754,18485438,17727727,11719571,36333669,12368238,27571603,21639932,21070282,18281162,15175416,20633052,29308093,26631625,7840755,18854152,28450881,17107763,10779333,15082888,17322554,21673742,27436006,33530928,12187378,15373898,16221895,12368240,11326281,25724209,18185983,17483097,16527433,17135461,14746985,12039051,27603307,22528351,27389686,25761766,11126568,26912865,25216663,10552051,15545713,32489435,28034676,16510580,16172529,21795750,7799926,35741751,17345676,15814816,18240566,12172959,28606835,9767691,14652739,10384043,16730849,27733546,18166240,15642364,7813911,30018307,17626886,21957310,34182464,30690181,17823769,17188821,10607616,16864796,17434692,29380577,23698293,17185004,10742088,14597180,22029548,28916913,22627028,12227999,8052527,20600705,26363800,16027952,18056681,15456132,19232383,9677292,12878470,16877810,17895280,12466812,23343042,10024242,30146671,26780549,16843687,30455747,17881255,11416211,12140242,11029070,18155858,19018283,16434051,34576060,15273327,9287426,17560999,17446352,18764926,21801021,32075563,10952214,17922896,17490833,16830182,33973013,19666780,12589758,22908128,18455443,17063380,15016989,28334904,17431169,12070800,31155508,26019167,16909913,20629982,27671023,12226481,34836553,18583609,28177843,23175715,26107894,17602167,26333314,9724768,15249661,34792587,12682288,19095434,18347593,17846510,18483693,26014613,25367621,17307883,12067657,17307271,10050283,16850215,30481296,19607716,21183607,17702923,17724661,24231191,11223264,18976468,22565186,16368779,19064677,8327507,15322092,18629665,18779144,24696401,21796384,8577717,28134931,18486212,11178742,11130982,9753719,15611173,21956148,19326338,10376302,18842687,26895051,17498830,31622354,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905 results

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The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis.

Piskurek O, Nishihara H, Okada N. Piskurek O, et al. Gene. 2009 Jul 15;441(1-2):111-8. doi: 10.1016/j.gene.2008.11.030. Epub 2008 Dec 14. Gene. 2009. PMID: 19118606

Novel SINE families from salmons validate Parahucho (Salmonidae) as a distinct genus and give evidence that SINEs can incorporate LINE-related 3'-tails of other SINEs.

Matveev V, Nishihara H, Okada N. Matveev V, et al. Mol Biol Evol. 2007 Aug;24(8):1656-66. doi: 10.1093/molbev/msm083. Epub 2007 Apr 29. Mol Biol Evol. 2007. PMID: 17470437

Sauria SINEs: Novel short interspersed retroposable elements that are widespread in reptile genomes.

Piskurek O, Austin CC, Okada N. Piskurek O, et al. J Mol Evol. 2006 May;62(5):630-44. doi: 10.1007/s00239-005-0201-5. Epub 2006 Apr 11. J Mol Evol. 2006. PMID: 16612539

Retroposons of salmonoid fishes (Actinopterygii: Salmonoidei) and their evolution.

Matveev V, Okada N. Matveev V, et al. Gene. 2009 Apr 1;434(1-2):16-28. doi: 10.1016/j.gene.2008.04.022. Epub 2008 May 22. Gene. 2009. PMID: 18590946 Review.

SINE retrotransposition during the evolution of the Pecoran ruminants.

Nijman IJ, van Tessel P, Lenstra JA. Nijman IJ, et al. J Mol Evol. 2002 Jan;54(1):9-16. doi: 10.1007/s00239-001-0012-2. J Mol Evol. 2002. PMID: 11734893

Evolutionary inventions and continuity of CORE-SINEs in mammals.

Gilbert N, Labuda D. Gilbert N, et al. J Mol Biol. 2000 May 5;298(3):365-77. doi: 10.1006/jmbi.2000.3695. J Mol Biol. 2000. PMID: 10772856

Bov-B-mobilized SINEs in vertebrate genomes.

Gogolevsky KP, Vassetzky NS, Kramerov DA. Gogolevsky KP, et al. Gene. 2008 Jan 15;407(1-2):75-85. doi: 10.1016/j.gene.2007.09.021. Epub 2007 Oct 5. Gene. 2008. PMID: 17976929

A new pair of CR1-like LINE and tRNA-derived SINE elements in Podarcis sicula genome.

Fantaccione S, Russo C, Palomba P, Rienzo M, Pontecorvo G. Fantaccione S, et al. Gene. 2004 Sep 15;339:189-98. doi: 10.1016/j.gene.2004.06.051. Gene. 2004. PMID: 15363859

Short retroposons in eukaryotic genomes.

Kramerov DA, Vassetzky NS. Kramerov DA, et al. Int Rev Cytol. 2005;247:165-221. doi: 10.1016/S0074-7696(05)47004-7. Int Rev Cytol. 2005. PMID: 16344113 Review.

Structural and evolutionary analyses of the Ty3/gypsy group of LTR retrotransposons in the genome of Anopheles gambiae.

Tubío JM, Naveira H, Costas J. Tubío JM, et al. Mol Biol Evol. 2005 Jan;22(1):29-39. doi: 10.1093/molbev/msh251. Epub 2004 Sep 8. Mol Biol Evol. 2005. PMID: 15356275

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