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Items: 1 to 20 of 96

1.

A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements.

Mittler G, Butter F, Mann M.

Genome Res. 2009 Feb;19(2):284-93. doi: 10.1101/gr.081711.108. Epub 2008 Nov 17.

2.

A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein.

Bartels SJ, Spruijt CG, Brinkman AB, Jansen PW, Vermeulen M, Stunnenberg HG.

PLoS One. 2011;6(10):e25884. doi: 10.1371/journal.pone.0025884. Epub 2011 Oct 3.

3.

Unbiased RNA-protein interaction screen by quantitative proteomics.

Butter F, Scheibe M, Mörl M, Mann M.

Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10626-31. doi: 10.1073/pnas.0812099106. Epub 2009 Jun 16.

4.
5.

DNA affinity capture and protein profiling by SELDI-TOF mass spectrometry: effect of DNA methylation.

Bane TK, LeBlanc JF, Lee TD, Riggs AD.

Nucleic Acids Res. 2002 Jul 15;30(14):e69.

6.

Isolation of an Alu repetitive DNA binding protein and effect of CpG methylation on binding to its recognition sequence.

Cox GS, Gutkin DW, Haas MJ, Cosgrove DE.

Biochim Biophys Acta. 1998 Mar 4;1396(1):67-87.

PMID:
9524225
7.

Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC).

Amanchy R, Kalume DE, Iwahori A, Zhong J, Pandey A.

J Proteome Res. 2005 Sep-Oct;4(5):1661-71.

PMID:
16212419
8.

Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.

Ong SE, Mittler G, Mann M.

Nat Methods. 2004 Nov;1(2):119-26. Epub 2004 Oct 21.

PMID:
15782174
9.
10.
12.

High-resolution DNA-binding specificity analysis of yeast transcription factors.

Zhu C, Byers KJ, McCord RP, Shi Z, Berger MF, Newburger DE, Saulrieta K, Smith Z, Shah MV, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A, Murthy T, Labaer J, Bulyk ML.

Genome Res. 2009 Apr;19(4):556-66. doi: 10.1101/gr.090233.108. Epub 2009 Jan 21.

13.

Use of stable isotope labeling by amino acids in cell culture (SILAC) for phosphotyrosine protein identification and quantitation.

Zhang G, Neubert TA.

Methods Mol Biol. 2009;527:79-92, xi. doi: 10.1007/978-1-60327-834-8_7. Review.

14.

Stable isotope labeling by amino acids in cell culture (SILAC).

Gruhler S, Kratchmarova I.

Methods Mol Biol. 2008;424:101-11. doi: 10.1007/978-1-60327-064-9_9.

PMID:
18369856
15.

Characterization of the human p11 promoter sequence.

Huang X, Pawliczak R, Yao XL, Madara P, Alsaaty S, Shelhamer JH, Cowan MJ.

Gene. 2003 May 22;310:133-42.

PMID:
12801640
18.

Quantitative proteomics using stable isotope labeling with amino acids in cell culture.

Harsha HC, Molina H, Pandey A.

Nat Protoc. 2008;3(3):505-16. doi: 10.1038/nprot.2008.2.

PMID:
18323819
20.

Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC).

Park SS, Wu WW, Zhou Y, Shen RF, Martin B, Maudsley S.

J Proteomics. 2012 Jun 27;75(12):3720-32. doi: 10.1016/j.jprot.2012.04.035. Epub 2012 May 7.

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